Conservation of cofitness between HER17_RS15910 and HER17_RS05550 in Pectobacterium carotovorum WPP14

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15910 2-dehydropantoate 2-reductase 1.0 HER17_RS05550 aspartate 1-decarboxylase 0.95 3
Dickeya dianthicola ME23 0.79 DZA65_RS05940 2-dehydropantoate 2-reductase 0.90 DZA65_RS17165 aspartate 1-decarboxylase 0.92 1
Dickeya dadantii 3937 0.79 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.91 DDA3937_RS15965 aspartate 1-decarboxylase 0.88 12
Dickeya dianthicola 67-19 0.79 HGI48_RS05615 2-dehydropantoate 2-reductase 0.90 HGI48_RS16080 aspartate 1-decarboxylase 0.81 18
Serratia liquefaciens MT49 0.69 IAI46_04950 2-dehydropantoate 2-reductase 0.92 IAI46_21250 aspartate 1-decarboxylase low > 86
Enterobacter sp. TBS_079 0.63 MPMX20_01016 2-dehydropantoate 2-reductase 0.82 MPMX20_00825 Aspartate 1-decarboxylase low > 85
Klebsiella michiganensis M5al 0.63 BWI76_RS06405 2-dehydropantoate 2-reductase 0.81 BWI76_RS04985 aspartate 1-decarboxylase 0.21 72
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.81 EX28DRAFT_3728 L-aspartate 1-decarboxylase (EC 4.1.1.11) 0.78 7
Rahnella sp. WP5 0.63 EX31_RS22180 2-dehydropantoate 2-reductase 0.90 EX31_RS03290 aspartate 1-decarboxylase low > 89
Escherichia coli ECOR38 0.63 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.82 HEPCGN_08395 panD aspartate 1-decarboxylase 0.72 1
Escherichia coli BW25113 0.63 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.82 b0131 panD aspartate 1-decarboxylase precursor (NCBI) 0.19 41
Escherichia coli BL21 0.63 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.82 ECD_00130 aspartate 1-decarboxylase low > 61
Escherichia coli Nissle 1917 0.63 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.82 ECOLIN_RS00725 aspartate 1-decarboxylase 0.72 1
Escherichia fergusonii Becca 0.63 EFB2_03632 2-dehydropantoate 2-reductase 0.82 EFB2_03914 Aspartate 1-decarboxylase low > 86
Escherichia coli ECOR27 0.62 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.82 NOLOHH_02760 panD aspartate 1-decarboxylase 0.65 38
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.82 OHPLBJKB_03530 Aspartate 1-decarboxylase low > 73
Escherichia coli ECRC62 0.62 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.82 BNILDI_08910 panD aspartate 1-decarboxylase 0.79 12
Escherichia coli ECRC98 0.61 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.82 JDDGAC_14010 panD aspartate 1-decarboxylase low > 86
Escherichia coli ECRC99 0.61 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.82 KEDOAH_17740 panD aspartate 1-decarboxylase — —
Escherichia coli ECRC102 0.61 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.82 NIAGMN_08265 panD aspartate 1-decarboxylase — —
Escherichia coli ECRC101 0.61 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.82 MCAODC_00930 panD aspartate 1-decarboxylase 0.78 18
Escherichia coli ECRC100 0.61 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.82 OKFHMN_10415 panD aspartate 1-decarboxylase low > 80
Pantoea sp. MT58 0.61 IAI47_14715 2-dehydropantoate 2-reductase 0.83 IAI47_15665 aspartate 1-decarboxylase low > 76
Erwinia tracheiphila SCR3 0.58 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.85 LU632_RS20110 panD aspartate 1-decarboxylase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4336 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.83 GFF93 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 78
Pseudomonas stutzeri RCH2 0.25 Psest_1140 2-dehydropantoate 2-reductase 0.58 Psest_0994 L-aspartate-alpha-decarboxylase 0.39 3
Pseudomonas sp. S08-1 0.24 OH686_08220 2-dehydropantoate 2-reductase 0.57 OH686_17235 aspartate 1-decarboxylase 0.79 19
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.58 PfGW456L13_1519 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 87
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_03645 2-dehydropantoate 2-reductase 0.58 AO353_14375 aspartate decarboxylase low > 101
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.58 Pf6N2E2_5151 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 103
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.58 Pf1N1B4_2852 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 87
Pseudomonas sp. RS175 0.20 PFR28_03426 2-dehydropantoate 2-reductase 0.58 PFR28_03723 Aspartate 1-decarboxylase low > 88
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS09230 2-dehydropantoate 2-reductase 0.56 HSERO_RS03485 aspartate decarboxylase — —
Variovorax sp. OAS795 0.14 ABID97_RS24580 2-dehydropantoate 2-reductase 0.53 ABID97_RS28990 aspartate 1-decarboxylase low > 91
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS15450 2-dehydropantoate 2-reductase 0.56 ABZR87_RS01345 aspartate 1-decarboxylase — —
Rhodanobacter denitrificans MT42 0.10 LRK55_RS02820 2-dehydropantoate 2-reductase 0.47 LRK55_RS14840 aspartate 1-decarboxylase low > 63
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS03070 2-dehydropantoate 2-reductase 0.47 LRK54_RS15125 aspartate 1-decarboxylase — —
Burkholderia phytofirmans PsJN 0.10 BPHYT_RS21975 2-dehydropantoate 2-reductase 0.51 BPHYT_RS04920 aspartate 1-decarboxylase low > 109
Paraburkholderia graminis OAS925 0.09 ABIE53_004184 2-dehydropantoate 2-reductase 0.51 ABIE53_001259 aspartate 1-decarboxylase — —
Rhodanobacter sp. FW510-T8 0.09 OKGIIK_09940 panE 2-dehydropantoate 2-reductase 0.47 OKGIIK_03895 panD aspartate 1-decarboxylase low > 52
Ralstonia solanacearum GMI1000 0.08 RS_RS00860 2-dehydropantoate 2-reductase 0.56 RS_RS13665 aspartate 1-decarboxylase — —

Not shown: 20 genomes with orthologs for HER17_RS15910 only; 28 genomes with orthologs for HER17_RS05550 only