Conservation of cofitness between HER17_RS04235 and HER17_RS04240 in Pectobacterium carotovorum WPP14

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04235 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 1.0 HER17_RS04240 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.98 2
Dickeya dadantii 3937 0.80 DDA3937_RS16945 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 DDA3937_RS16940 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.98 1
Dickeya dianthicola 67-19 0.79 HGI48_RS17015 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 HGI48_RS17010 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.94 1
Dickeya dianthicola ME23 0.79 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 DZA65_RS18085 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.93 1
Serratia liquefaciens MT49 0.78 IAI46_03685 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 IAI46_03690 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.92 1
Pantoea sp. MT58 0.78 IAI47_04150 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 IAI47_04155 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.99 1
Rahnella sp. WP5 0.77 EX31_RS07905 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.85 EX31_RS07900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.99 1
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2853 sulfite reductase [NADPH] flavoprotein, alpha-component 0.85 EX28DRAFT_2852 sulfite reductase (NADPH) hemoprotein, beta-component 0.93 2
Escherichia coli ECRC62 0.75 BNILDI_10735 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 BNILDI_10740 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.98 12
Escherichia coli ECOR27 0.75 NOLOHH_12185 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 NOLOHH_12190 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.91 42
Escherichia coli BW25113 0.75 b2764 cysJ sulfite reductase, alpha subunit, flavoprotein (NCBI) 0.84 b2763 cysI sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) 0.98 2
Enterobacter sp. TBS_079 0.75 MPMX20_03643 Sulfite reductase [NADPH] flavoprotein alpha-component 0.85 MPMX20_03642 Sulfite reductase [NADPH] hemoprotein beta-component 0.94 1
Escherichia coli BL21 0.75 ECD_02609 sulfite reductase, alpha subunit, flavoprotein 0.84 ECD_02608 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding 0.84 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00969 Sulfite reductase [NADPH] flavoprotein alpha-component 0.85 OHPLBJKB_00970 Sulfite reductase [NADPH] hemoprotein beta-component low > 73
Escherichia fergusonii Becca 0.75 EFB2_01153 Sulfite reductase [NADPH] flavoprotein alpha-component 0.84 EFB2_01154 Sulfite reductase [NADPH] hemoprotein beta-component low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS15410 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 ECOLIN_RS15405 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.66 51
Escherichia coli ECOR38 0.75 HEPCGN_19095 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 HEPCGN_19090 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.96 27
Klebsiella michiganensis M5al 0.74 BWI76_RS22765 sulfite reductase subunit alpha 0.84 BWI76_RS22760 sulfite reductase subunit beta 0.96 1
Escherichia coli ECRC101 0.74 MCAODC_10895 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 MCAODC_10900 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.96 2
Escherichia coli ECRC102 0.74 NIAGMN_18140 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 NIAGMN_18145 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC100 0.74 OKFHMN_20370 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 OKFHMN_20375 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.98 23
Escherichia coli ECRC99 0.74 KEDOAH_07755 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 KEDOAH_07750 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC98 0.74 JDDGAC_24035 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.84 JDDGAC_24040 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.89 5
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4820 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.84 GFF4819 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 78
Erwinia tracheiphila SCR3 0.73 LU632_RS06400 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 LU632_RS06405 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.93 9
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_02010 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.74 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.53 5
Shewanella amazonensis SB2B 0.49 Sama_2839 sulfite reductase subunit alpha (RefSeq) 0.71 Sama_2838 sulfite reductase subunit beta (RefSeq) 0.99 1
Shewanella oneidensis MR-1 0.49 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component (NCBI ptt file) 0.58 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) 0.97 1
Shewanella loihica PV-4 0.49 Shew_0665 sulfite reductase (NADPH) flavoprotein, alpha chain (RefSeq) 0.57 Shew_0666 sulfite reductase subunit beta (RefSeq) 0.97 1
Shewanella sp. ANA-3 0.48 Shewana3_0855 sulfite reductase (NADPH) alpha subunit (RefSeq) 0.59 Shewana3_0856 sulfite reductase subunit beta (RefSeq) 0.99 1
Alteromonas macleodii MIT1002 0.47 MIT1002_03380 Sulfite reductase [NADPH] flavoprotein alpha-component 0.76 MIT1002_03379 Sulfite reductase [NADPH] hemoprotein beta-component
Lysobacter sp. OAE881 0.43 ABIE51_RS15825 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.47 ABIE51_RS15830 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.98 8
Castellaniella sp019104865 MT123 0.39 ABCV34_RS00220 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.46 ABCV34_RS00215 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.96 1
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_05960 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.45 OKGIIK_05965 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 52
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS05905 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.49 ABZR86_RS05900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.98 2
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS00930 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.45 LRK54_RS00925 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.63 2
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2160 sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2) 0.48 B158DRAFT_2161 sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) low > 40
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1258.1 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.45 Xcc-8004.1257.1 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.95 2
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.08 CCNA_01177 sulfite reductase, beta subunit low > 67
Caulobacter crescentus NA1000 0.12 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.08 CCNA_01177 sulfite reductase, beta subunit low > 66

Not shown: 3 genomes with orthologs for HER17_RS04235 only; 28 genomes with orthologs for HER17_RS04240 only