Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS04205 | | 6-carboxytetrahydropterin synthase QueD | 1.0 | HER17_RS03235 | | protein transport protein HofC | 0.56 | 14 |
Dickeya dadantii 3937 | 0.94 | DDA3937_RS16965 | | 6-carboxytetrahydropterin synthase QueD | 0.51 | DDA3937_RS17970 | | protein transport protein HofC | low | > 74 |
Dickeya dianthicola ME23 | 0.93 | DZA65_RS18105 | | 6-carboxytetrahydropterin synthase QueD | 0.51 | DZA65_RS19050 | | protein transport protein HofC | low | > 75 |
Dickeya dianthicola 67-19 | 0.93 | HGI48_RS17030 | | 6-carboxytetrahydropterin synthase QueD | 0.51 | HGI48_RS17905 | | protein transport protein HofC | low | > 71 |
Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2854 | | queuosine biosynthesis protein QueD | 0.30 | EX28DRAFT_3699 | | Type II secretory pathway, component PulF | low | > 76 |
Escherichia fergusonii Becca | 0.89 | EFB2_01152 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.34 | EFB2_03943 | | Type II secretion system protein F | low | > 86 |
Escherichia coli ECRC102 | 0.89 | NIAGMN_18135 | queD | 6-carboxytetrahydropterin synthase QueD | 0.35 | NIAGMN_08395 | hofC | protein transport protein HofC | — | — |
Escherichia coli BL21 | 0.89 | ECD_02610 | | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) | 0.35 | ECD_00105 | | assembly protein in type IV pilin biogenesis, transmembrane protein | low | > 61 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.89 | OHPLBJKB_00968 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.35 | OHPLBJKB_03555 | | Type II secretion system protein F | low | > 73 |
Escherichia coli Nissle 1917 | 0.89 | ECOLIN_RS15415 | | 6-carboxytetrahydropterin synthase QueD | 0.34 | ECOLIN_RS00565 | | protein transport protein HofC | low | > 55 |
Escherichia coli ECRC100 | 0.89 | OKFHMN_20365 | queD | 6-carboxytetrahydropterin synthase QueD | 0.35 | OKFHMN_10545 | hofC | protein transport protein HofC | low | > 80 |
Escherichia coli ECRC98 | 0.89 | JDDGAC_24030 | queD | 6-carboxytetrahydropterin synthase QueD | 0.35 | JDDGAC_14140 | hofC | protein transport protein HofC | 0.51 | 44 |
Escherichia coli ECRC101 | 0.89 | MCAODC_10890 | queD | 6-carboxytetrahydropterin synthase QueD | 0.35 | MCAODC_01060 | hofC | protein transport protein HofC | low | > 87 |
Enterobacter sp. TBS_079 | 0.89 | MPMX20_03644 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.32 | MPMX20_00797 | | Type II secretion system protein F | low | > 85 |
Escherichia coli BW25113 | 0.89 | b2765 | ygcM | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) | 0.35 | b0106 | hofC | assembly protein in type IV pilin biogenesis, transmembrane protein (NCBI) | low | > 76 |
Escherichia coli ECRC62 | 0.89 | BNILDI_10730 | queD | 6-carboxytetrahydropterin synthase QueD | 0.35 | BNILDI_08720 | hofC | protein transport protein HofC | low | > 75 |
Escherichia coli ECOR27 | 0.89 | NOLOHH_12180 | queD | 6-carboxytetrahydropterin synthase QueD | 0.35 | NOLOHH_02890 | hofC | protein transport protein HofC | low | > 75 |
Escherichia coli ECRC99 | 0.89 | KEDOAH_07760 | queD | 6-carboxytetrahydropterin synthase QueD | 0.35 | KEDOAH_17610 | hofC | protein transport protein HofC | — | — |
Klebsiella michiganensis M5al | 0.89 | BWI76_RS22775 | | 6-carboxytetrahydropterin synthase QueD | 0.36 | BWI76_RS04830 | | type IV pilin biogenesis protein | low | > 92 |
Escherichia coli ECOR38 | 0.88 | HEPCGN_19100 | queD | 6-carboxytetrahydropterin synthase QueD | 0.34 | HEPCGN_08525 | hofC | protein transport protein HofC | low | > 87 |
Serratia liquefaciens MT49 | 0.88 | IAI46_03680 | | 6-carboxytetrahydropterin synthase QueD | 0.47 | IAI46_03515 | | protein transport protein HofC | low | > 86 |
Pantoea sp. MT58 | 0.86 | IAI47_04145 | | 6-carboxytetrahydropterin synthase QueD | 0.40 | IAI47_15860 | | protein transport protein HofC | low | > 76 |
Rahnella sp. WP5 | 0.86 | EX31_RS07915 | | 6-carboxytetrahydropterin synthase QueD | 0.42 | EX31_RS03530 | | protein transport protein HofC | low | > 89 |
Erwinia tracheiphila SCR3 | 0.86 | LU632_RS06395 | queD | 6-carboxytetrahydropterin synthase QueD | 0.41 | LU632_RS03025 | hofC | protein transport protein HofC | low | > 74 |
Vibrio cholerae E7946 ATCC 55056 | 0.81 | CSW01_06560 | | 6-carboxytetrahydropterin synthase QueD | 0.27 | CSW01_12280 | | type IV pilin assembly protein PilC | low | > 62 |
Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_110 | | Queuosine biosynthesis QueD, PTPS-I | 0.29 | Pf1N1B4_2841 | | Type IV fimbrial assembly protein PilC | low | > 87 |
Pseudomonas sp. RS175 | 0.75 | PFR28_02851 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.25 | PFR28_03732 | | Type II secretion system protein F | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.75 | Pf6N2E2_37 | | 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I | 0.25 | Pf6N2E2_5141 | | Type IV fimbrial assembly protein PilC | low | > 103 |
Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS10415 | | 6-carboxytetrahydropterin synthase QueD | 0.25 | PFLU_RS03945 | | type II secretion system F family protein | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS10415 | | 6-carboxytetrahydropterin synthase QueD | 0.25 | PFLU_RS03945 | | type II secretion system F family protein | low | > 109 |
Pseudomonas fluorescens FW300-N2C3 | 0.75 | AO356_21260 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.26 | AO356_16010 | | type II secretion system protein F | low | > 104 |
Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_19760 | | 6-carboxy-5,6,7,8-tetrahydropterin synthase | 0.27 | AO353_14325 | | type II secretion system protein F | low | > 101 |
Pseudomonas fluorescens GW456-L13 | 0.74 | PfGW456L13_2447 | | 6-carboxytetrahydropterin synthase (EC 4.1.2.50) @ Queuosine biosynthesis QueD, PTPS-I | 0.28 | PfGW456L13_1509 | | Type IV fimbrial assembly protein PilC | low | > 87 |
Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_3215 | | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein | 0.28 | Psyr_0797 | | type II secretion system protein | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_3215 | | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein | 0.28 | Psyr_0797 | | type II secretion system protein | — | — |
Lysobacter sp. OAE881 | 0.71 | ABIE51_RS17950 | | 6-carboxytetrahydropterin synthase QueD | 0.27 | ABIE51_RS04810 | | type II secretion system F family protein | low | > 62 |
Pseudomonas stutzeri RCH2 | 0.70 | Psest_2010 | | queuosine biosynthesis protein QueD | 0.27 | Psest_3287 | | Type II secretory pathway, component PulF | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.67 | Xcc-8004.4528.1 | | hypothetical protein | 0.27 | Xcc-8004.1346.1 | | Type IV fimbrial assembly protein PilC | low | > 74 |
Pseudomonas sp. S08-1 | 0.65 | OH686_00030 | | queuosine biosynthesis protein QueD | 0.27 | OH686_16500 | | Type IV fimbrial assembly protein PilC | low | > 80 |
Dyella japonica UNC79MFTsu3.2 | 0.61 | ABZR86_RS13650 | | 6-carboxytetrahydropterin synthase QueD | 0.24 | ABZR86_RS10045 | | type II secretion system F family protein | low | > 74 |
Not shown: 21 genomes with orthologs for HER17_RS04205 only; 12 genomes with orthologs for HER17_RS03235 only