Conservation of cofitness between GFF4449 and GFF7379 in Variovorax sp. SCN45

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF4449 TldD protein, part of TldE/TldD proteolytic complex 1.0 GFF7379 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) 0.92 8
Variovorax sp. OAS795 0.95 ABID97_RS06335 metalloprotease TldD 0.96 ABID97_RS19415 acyl-CoA dehydrogenase family protein low > 91
Acidovorax sp. GW101-3H11 0.86 Ac3H11_4036 TldD protein, part of TldE/TldD proteolytic complex 0.86 Ac3H11_2359 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 79
Herbaspirillum seropedicae SmR1 0.73 HSERO_RS07155 peptidase C69 0.72 HSERO_RS12750 acyl-CoA dehydrogenase low > 78
Castellaniella sp019104865 MT123 0.70 ABCV34_RS02590 metalloprotease TldD 0.75 ABCV34_RS03995 acyl-CoA dehydrogenase family protein low > 48
Alteromonas macleodii MIT1002 0.59 MIT1002_00227 protease TldD 0.72 MIT1002_01978 Acyl-CoA dehydrogenase low > 70
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.1883.1 TldD protein, part of TldE/TldD proteolytic complex 0.72 Xcc-8004.3688.1 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) low > 74
Shewanella sp. ANA-3 0.58 Shewana3_3641 microcin-processing peptidase 2 (RefSeq) 0.70 Shewana3_2769 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) low > 73
Shewanella oneidensis MR-1 0.57 SO4091 tldD tldD protein (NCBI ptt file) 0.70 SO1679 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) low > 76
Shewanella loihica PV-4 0.56 Shew_0410 peptidase U62, modulator of DNA gyrase (RefSeq) 0.70 Shew_1669 butyryl-CoA dehydrogenase (RefSeq) low > 60
Dickeya dianthicola 67-19 0.56 HGI48_RS01380 metalloprotease TldD 0.45 HGI48_RS04780 acyl-CoA dehydrogenase family protein low > 71
Pseudomonas sp. S08-1 0.55 OH686_08580 TldD protein, part of TldE/TldD proteolytic complex 0.65 OH686_05870 Branched-chain acyl-CoA dehydrogenase low > 80
Shewanella amazonensis SB2B 0.55 Sama_0474 TldD protein (RefSeq) 0.69 Sama_1377 butyryl-CoA dehydrogenase (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.54 AMB_RS21030 metalloprotease TldD 0.58 AMB_RS18150 acyl-CoA dehydrogenase low > 64
Rhodospirillum rubrum S1H 0.54 Rru_A0567 Peptidase U62, modulator of DNA gyrase (NCBI) 0.57 Rru_A1835 Butyryl-CoA dehydrogenase (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_2252 Predicted Zn-dependent proteases and their inactivated homologs 0.53 Ga0059261_3681 Acyl-CoA dehydrogenases low > 68
Azospirillum brasilense Sp245 0.52 AZOBR_RS10600 peptidase C69 0.62 AZOBR_RS22365 acyl-CoA dehydrogenase low > 97
Azospirillum sp. SherDot2 0.52 MPMX19_00882 Metalloprotease TldD 0.55 MPMX19_05422 Acyl-CoA dehydrogenase low > 112
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_03522 Zn-dependent protease TldD 0.62 CCNA_01412 acyl-CoA dehydrogenase, short-chain specific low > 67
Caulobacter crescentus NA1000 0.51 CCNA_03522 Zn-dependent protease TldD 0.62 CCNA_01412 acyl-CoA dehydrogenase, short-chain specific low > 66
Sinorhizobium meliloti 1021 0.50 SMc00960 hypothetical protein 0.53 SM_b20753 acyl-CoA dehydrogenase low > 103
Rhodopseudomonas palustris CGA009 0.50 TX73_004255 metalloprotease TldD 0.58 TX73_017845 isobutyryl-CoA dehydrogenase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS10860 metalloprotease TldD 0.58 A4249_RS03585 isobutyryl-CoA dehydrogenase low > 48
Phaeobacter inhibens DSM 17395 0.49 PGA1_c06240 protein TldD 0.52 PGA1_c17340 acyl-CoA dehydrogenase AcdA low > 62
Dinoroseobacter shibae DFL-12 0.48 Dshi_1139 peptidase U62 modulator of DNA gyrase (RefSeq) 0.51 Dshi_1750 acyl-CoA dehydrogenase domain protein (RefSeq) low > 64

Not shown: 65 genomes with orthologs for GFF4449 only; 3 genomes with orthologs for GFF7379 only