Conservation of cofitness between GFF1247 and GFF6666 in Variovorax sp. SCN45

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF1247 Sulfate and thiosulfate binding protein CysP 1.0 GFF6666 Transcriptional regulator protein 0.51 16
Variovorax sp. OAS795 0.90 ABID97_RS15465 sulfate ABC transporter substrate-binding protein 0.82 ABID97_RS20885 LytTR family DNA-binding domain-containing protein low > 91
Acidovorax sp. GW101-3H11 0.76 Ac3H11_581 Sulfate and thiosulfate binding protein CysP 0.54 Ac3H11_3622 Transcriptional regulator protein low > 79
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS08185 sulfate transporter subunit 0.47 HSERO_RS18060 LytR family transcriptional regulator low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF5027 Sulfate and thiosulfate binding protein CysP 0.57 GFF3592 Transcriptional regulator protein low > 90
Azospirillum brasilense Sp245 0.66 AZOBR_RS19265 sulfate transporter subunit 0.17 AZOBR_RS22560 transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS11490 sulfate ABC transporter substrate-binding protein 0.38 ABZR87_RS11570 LytTR family DNA-binding domain-containing protein low > 80
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS12295 ABC transporter permease 0.49 RR42_RS16735 LytR family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS00035 sulfate ABC transporter substrate-binding protein 0.37 RALBFv3_RS00120 DNA-binding response regulator low > 76
Ralstonia solanacearum PSI07 0.64 RPSI07_RS17445 sulfate ABC transporter substrate-binding protein 0.39 RPSI07_RS17365 DNA-binding response regulator low > 81
Ralstonia solanacearum UW163 0.64 UW163_RS13365 sulfate ABC transporter substrate-binding protein 0.37 UW163_RS13450 DNA-binding response regulator — —
Ralstonia solanacearum GMI1000 0.63 RS_RS06700 sulfate ABC transporter substrate-binding protein 0.37 RS_RS06780 DNA-binding response regulator low > 80
Pectobacterium carotovorum WPP14 0.62 HER17_RS05670 sulfate ABC transporter substrate-binding protein 0.18 HER17_RS05370 two-component system response regulator BtsR low > 75
Enterobacter asburiae PDN3 0.62 EX28DRAFT_4391 sulfate/thiosulfate-binding protein 0.19 EX28DRAFT_0437 two component transcriptional regulator, LytTR family low > 76
Escherichia coli BW25113 0.61 b3917 sbp sulfate transporter subunit (NCBI) 0.18 b2125 yehT orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.61 NOLOHH_05955 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 NOLOHH_15235 btsR two-component system response regulator BtsR low > 75
Escherichia coli BL21 0.61 ECD_03802 sulfate transporter subunit 0.18 ECD_02054 putative response regulator in two-component system withYehU low > 61
Escherichia coli ECRC62 0.61 BNILDI_05575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 BNILDI_14185 btsR two-component system response regulator BtsR low > 75
Escherichia fergusonii Becca 0.61 EFB2_04701 Sulfate-binding protein 0.18 EFB2_01731 Transcriptional regulatory protein BtsR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_04134 Sulfate-binding protein 0.18 OHPLBJKB_01586 Transcriptional regulatory protein BtsR low > 73
Escherichia coli Nissle 1917 0.61 ECOLIN_RS22565 sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 ECOLIN_RS12450 two-component system response regulator BtsR low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2284 Sulfate-binding protein Sbp 0.18 GFF3820 Two-component response-regulatory protein YehT low > 78
Escherichia coli ECOR38 0.61 HEPCGN_12465 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.17 HEPCGN_02640 btsR two-component system response regulator BtsR low > 87
Escherichia coli ECRC101 0.61 MCAODC_04320 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 MCAODC_21245 btsR two-component system response regulator BtsR low > 87
Escherichia coli ECRC99 0.61 KEDOAH_14340 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 KEDOAH_04250 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC100 0.61 OKFHMN_13820 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 OKFHMN_23915 btsR two-component system response regulator BtsR 0.69 5
Escherichia coli ECRC102 0.61 NIAGMN_11575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 NIAGMN_21850 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC98 0.61 JDDGAC_17445 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp 0.18 JDDGAC_28005 btsR two-component system response regulator BtsR low > 86
Enterobacter sp. TBS_079 0.61 MPMX20_04551 Sulfate-binding protein 0.19 MPMX20_03092 Transcriptional regulatory protein BtsR low > 85
Dickeya dadantii 3937 0.61 DDA3937_RS15850 sulfate ABC transporter substrate-binding protein 0.17 DDA3937_RS16365 two-component system response regulator BtsR low > 74
Dickeya dianthicola ME23 0.61 DZA65_RS17075 sulfate ABC transporter substrate-binding protein 0.17 DZA65_RS17550 two-component system response regulator BtsR low > 75
Dickeya dianthicola 67-19 0.61 HGI48_RS15990 sulfate ABC transporter substrate-binding protein 0.17 HGI48_RS16465 two-component system response regulator BtsR low > 71
Shewanella oneidensis MR-1 0.60 SO4652 sbp sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) 0.17 SO2823 response regulator (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.59 BWI76_RS27500 sulfate transporter subunit 0.19 BWI76_RS19470 DNA-binding response regulator low > 92
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.4087.1 Sulfate and thiosulfate binding protein CysP 0.32 Xcc-8004.4655.1 Transcriptional regulator protein low > 74
Pantoea sp. MT58 0.58 IAI47_00785 sulfate ABC transporter substrate-binding protein 0.15 IAI47_05560 response regulator transcription factor low > 76
Serratia liquefaciens MT49 0.58 IAI46_24640 sulfate ABC transporter substrate-binding protein 0.16 IAI46_23615 two-component system response regulator BtsR low > 86
Erwinia tracheiphila SCR3 0.57 LU632_RS21830 sulfate ABC transporter substrate-binding protein 0.17 LU632_RS20440 btsR two-component system response regulator BtsR low > 74
Lysobacter sp. OAE881 0.57 ABIE51_RS01855 sulfate ABC transporter substrate-binding protein 0.34 ABIE51_RS00550 LytTR family DNA-binding domain-containing protein low > 62
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS02880 sulfate ABC transporter substrate-binding protein 0.32 ABZR86_RS01420 LytTR family DNA-binding domain-containing protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_02850 sulfate ABC transporter substrate-binding protein 0.33 CSW01_18385 DNA-binding response regulator low > 62

Not shown: 34 genomes with orthologs for GFF1247 only; 20 genomes with orthologs for GFF6666 only