Conservation of cofitness between GFF4856 and GFF5509 in Hydrogenophaga sp. GW460-11-11-14-LB1

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4856 HflK protein 1.0 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor 0.76 14
Acidovorax sp. GW101-3H11 0.65 Ac3H11_1801 HflK protein 0.76 Ac3H11_3230 Gluconate utilization system Gnt-I transcriptional repressor low > 79
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS14765 membrane protein 0.41 HSERO_RS05460 LacI family transcription regulator low > 78
Castellaniella sp019104865 MT123 0.41 ABCV34_RS02660 FtsH protease activity modulator HflK 0.56 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS12545 membrane protein 0.44 BPHYT_RS00410 LacI family transcription regulator — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS02580 FtsH protease activity modulator HflK 0.55 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS02580 FtsH protease activity modulator HflK 0.55 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas putida KT2440 0.30 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.51 PP_3415 Transcriptional regulator, LacI family low > 96
Pseudomonas sp. RS175 0.30 PFR28_05123 Modulator of FtsH protease HflK 0.55 PFR28_00593 HTH-type transcriptional regulator GntR low > 88
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0574 protease FtsH subunit HflK 0.53 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0574 protease FtsH subunit HflK 0.53 Psyr_3336 transcriptional regulator, LacI family low > 86
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_01845 protease modulator HflK 0.30 CSW01_01485 transcriptional regulator low > 62
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_13155 hypothetical protein 0.54 AO353_03255 LacI family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_08645 hypothetical protein 0.55 AO356_05065 LacI family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_1410 HflK protein 0.55 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas simiae WCS417 0.29 PS417_02500 membrane protein 0.55 PS417_21990 LacI family transcriptional regulator — —
Pseudomonas stutzeri RCH2 0.29 Psest_0685 HflK protein 0.55 Psest_2126 Transcriptional regulators — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3612 HflK protein 0.54 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor low > 103
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_152 HflK protein 0.55 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Alteromonas macleodii MIT1002 0.27 MIT1002_03786 Modulator of FtsH protease HflK 0.28 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor low > 70
Dickeya dianthicola ME23 0.26 DZA65_RS19670 FtsH protease activity modulator HflK 0.29 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Dickeya dianthicola 67-19 0.25 HGI48_RS18535 FtsH protease activity modulator HflK 0.30 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Dickeya dadantii 3937 0.25 DDA3937_RS18600 FtsH protease activity modulator HflK 0.31 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Erwinia tracheiphila SCR3 0.24 LU632_RS02065 hflK FtsH protease activity modulator HflK 0.27 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF827 HflK protein 0.27 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Pantoea sp. MT58 0.24 IAI47_02600 FtsH protease activity modulator HflK 0.28 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Pectobacterium carotovorum WPP14 0.24 HER17_RS02595 FtsH protease activity modulator HflK 0.29 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Serratia liquefaciens MT49 0.24 IAI46_01635 FtsH protease activity modulator HflK 0.28 IAI46_23965 gluconate operon transcriptional repressor GntR low > 86
Escherichia fergusonii Becca 0.24 EFB2_04361 Modulator of FtsH protease HflK 0.27 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Enterobacter sp. TBS_079 0.24 MPMX20_00455 Modulator of FtsH protease HflK 0.27 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Escherichia coli ECOR38 0.24 HEPCGN_10475 hflK FtsH protease activity modulator HflK 0.27 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 85
Escherichia coli Nissle 1917 0.24 ECOLIN_RS24240 FtsH protease activity modulator HflK 0.27 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR — —
Enterobacter asburiae PDN3 0.24 EX28DRAFT_3371 HflK protein 0.27 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Escherichia coli ECRC99 0.24 KEDOAH_15910 hflK FtsH protease activity modulator HflK 0.27 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC62 0.23 BNILDI_06980 hflK FtsH protease activity modulator HflK 0.27 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC101 0.23 MCAODC_02760 hflK FtsH protease activity modulator HflK 0.27 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC102 0.23 NIAGMN_10095 hflK FtsH protease activity modulator HflK 0.27 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli BL21 0.23 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor 0.26 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 60
Escherichia coli BW25113 0.23 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.27 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC101 0.23 OKFHMN_12245 hflK FtsH protease activity modulator HflK 0.27 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC98 0.23 JDDGAC_15885 hflK FtsH protease activity modulator HflK 0.27 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECOR27 0.23 NOLOHH_04510 hflK FtsH protease activity modulator HflK 0.26 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03868 Modulator of FtsH protease HflK 0.27 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 73
Rhizobium sp. OAE497 0.21 ABIE40_RS11535 FtsH protease activity modulator HflK 0.27 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Sinorhizobium meliloti 1021 0.20 SMc01441 membrane bound protease 0.29 SM_b20667 LacI family transcriptional regulator low > 103

Not shown: 30 genomes with orthologs for GFF4856 only; 2 genomes with orthologs for GFF5509 only