Conservation of cofitness between GFF3115 and GFF5338 in Variovorax sp. SCN45

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF3115 Methionine ABC transporter substrate-binding protein 1.0 GFF5338 Phospholipid ABC transporter shuttle protein MlaC 0.53 18
Variovorax sp. OAS795 0.83 ABID97_RS21750 MetQ/NlpA family ABC transporter substrate-binding protein 0.83 ABID97_RS23195 ABC transporter substrate-binding protein low > 91
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS08955 methionine ABC transporter substrate-binding protein 0.47 HSERO_RS20380 hypothetical protein — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS28475 dioxygenase 0.49 RR42_RS18950 hypothetical protein low > 128
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS09135 MetQ/NlpA family lipoprotein 0.43 RALBFv3_RS06880 hypothetical protein low > 76
Ralstonia solanacearum UW163 0.59 UW163_RS04460 MetQ/NlpA family lipoprotein 0.43 UW163_RS06735 hypothetical protein — —
Ralstonia solanacearum PSI07 0.58 RPSI07_RS08135 MetQ/NlpA family lipoprotein 0.43 RPSI07_RS10355 hypothetical protein low > 81
Ralstonia solanacearum GMI1000 0.58 RS_RS16970 MetQ/NlpA family lipoprotein 0.43 RS_RS14825 hypothetical protein — —
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS04530 MetQ/NlpA family lipoprotein 0.44 ABZR87_RS02535 phospholipid-binding protein MlaC low > 80
Paraburkholderia graminis OAS925 0.58 ABIE53_005156 D-methionine transport system substrate-binding protein 0.43 ABIE53_003708 phospholipid transport system substrate-binding protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_01524 D-methionine transport system substrate-binding protein 0.43 H281DRAFT_05645 phospholipid transport system substrate-binding protein low > 103
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS02715 dioxygenase 0.42 BPHYT_RS17745 toluene tolerance family protein low > 109
Azospirillum sp. SherDot2 0.55 MPMX19_05549 D-methionine-binding lipoprotein MetQ 0.14 MPMX19_00632 Intermembrane phospholipid transport system binding protein MlaC low > 112
Acidovorax sp. GW101-3H11 0.54 Ac3H11_1311 Methionine ABC transporter substrate-binding protein 0.67 Ac3H11_4716 Toluene tolerance precursor — —
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS01570 MetQ/NlpA family lipoprotein 0.47 QEN71_RS27900 ABC transporter substrate-binding protein low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF5039 Methionine ABC transporter substrate-binding protein 0.67 GFF1321 Uncharacterized ABC transporter, auxiliary component YrbC low > 90
Azospirillum brasilense Sp245 0.49 AZOBR_RS19465 dioxygenase 0.13 AZOBR_RS09525 toluene tolerance protein low > 97
Rhodospirillum rubrum S1H 0.45 Rru_A2417 Lipoprotein YaeC (NCBI) 0.14 Rru_A0056 Toluene tolerance (NCBI) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF23 Methionine ABC transporter substrate-binding protein 0.15 GFF2936 Uncharacterized ABC transporter, auxiliary component YrbC low > 78
Escherichia coli Nissle 1917 0.43 ECOLIN_RS01085 methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 ECOLIN_RS18375 phospholipid-binding protein MlaC — —
Escherichia fergusonii Becca 0.43 EFB2_03846 D-methionine-binding lipoprotein MetQ 0.16 EFB2_00631 Intermembrane phospholipid transport system binding protein MlaC low > 86
Escherichia coli BW25113 0.43 b0197 metQ DL-methionine transporter subunit (NCBI) 0.16 b3192 yrbC predicted ABC-type organic solvent transporter (NCBI) low > 76
Escherichia coli ECOR38 0.43 HEPCGN_08000 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 HEPCGN_16865 mlaC phospholipid-binding protein MlaC low > 87
Escherichia coli BL21 0.43 ECD_00196 DL-methionine transporter subunit 0.16 ECD_03057 ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein low > 61
Pantoea sp. MT58 0.43 IAI47_15395 MetQ/NlpA family lipoprotein 0.15 IAI47_17130 phospholipid-binding protein MlaC low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03464 D-methionine-binding lipoprotein MetQ 0.16 OHPLBJKB_00508 putative phospholipid-binding protein MlaC low > 73
Escherichia coli ECOR27 0.43 NOLOHH_02405 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 NOLOHH_09790 mlaC phospholipid-binding protein MlaC low > 75
Escherichia coli ECRC62 0.43 BNILDI_09265 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 BNILDI_01745 mlaC phospholipid-binding protein MlaC low > 75
Erwinia tracheiphila SCR3 0.43 LU632_RS19830 MetQ/NlpA family lipoprotein 0.13 LU632_RS21230 mlaC phospholipid-binding protein MlaC low > 74
Rahnella sp. WP5 0.43 EX31_RS12890 MetQ/NlpA family lipoprotein 0.16 EX31_RS12450 phospholipid-binding protein MlaC low > 89
Escherichia coli ECRC102 0.42 NIAGMN_07910 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 NIAGMN_15750 mlaC phospholipid-binding protein MlaC — —
Escherichia coli ECRC101 0.42 MCAODC_00575 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 MCAODC_08510 mlaC phospholipid-binding protein MlaC low > 87
Escherichia coli ECRC98 0.42 JDDGAC_13655 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 JDDGAC_21615 mlaC phospholipid-binding protein MlaC low > 86
Escherichia coli ECRC100 0.42 OKFHMN_10060 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 OKFHMN_17990 mlaC phospholipid-binding protein MlaC low > 80
Serratia liquefaciens MT49 0.42 IAI46_20085 MetQ/NlpA family lipoprotein 0.16 IAI46_22415 phospholipid-binding protein MlaC low > 86
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3785 lipoprotein, YaeC family 0.15 EX28DRAFT_3246 ABC-type transport system involved in resistance to organic solvents, auxiliary component low > 76
Escherichia coli ECRC99 0.42 KEDOAH_18095 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.16 KEDOAH_10160 mlaC phospholipid-binding protein MlaC — —
Klebsiella michiganensis M5al 0.42 BWI76_RS05355 methionine ABC transporter substrate-binding protein MetQ 0.15 BWI76_RS25215 phospholipid-binding protein MlaC low > 92
Enterobacter sp. TBS_079 0.42 MPMX20_00881 D-methionine-binding lipoprotein MetQ 0.15 MPMX20_04098 Intermembrane phospholipid transport system binding protein MlaC low > 85
Pectobacterium carotovorum WPP14 0.41 HER17_RS04370 MetQ/NlpA family lipoprotein 0.14 HER17_RS20010 phospholipid-binding protein MlaC low > 75
Dickeya dadantii 3937 0.41 DDA3937_RS16855 MetQ/NlpA family lipoprotein 0.15 DDA3937_RS01580 phospholipid-binding protein MlaC low > 74
Dickeya dianthicola 67-19 0.40 HGI48_RS16925 MetQ/NlpA family lipoprotein 0.16 HGI48_RS01495 phospholipid-binding protein MlaC low > 71
Dickeya dianthicola ME23 0.40 DZA65_RS18000 MetQ/NlpA family lipoprotein 0.16 DZA65_RS01560 phospholipid-binding protein MlaC low > 75
Acinetobacter radioresistens SK82 0.23 MPMX26_01857 D-methionine-binding lipoprotein MetQ 0.16 MPMX26_02738 Intermembrane phospholipid transport system binding protein MlaC — —

Not shown: 5 genomes with orthologs for GFF3115 only; 28 genomes with orthologs for GFF5338 only