Conservation of cofitness between PS417_13465 and PS417_02460 in Pseudomonas simiae WCS417

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_13465 hemolysin D 1.0 PS417_02460 epoxyqueuosine reductase 0.22 1
Pseudomonas fluorescens SBW25 0.96 PFLU_RS15325 HlyD family type I secretion periplasmic adaptor subunit 0.98 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS15325 HlyD family type I secretion periplasmic adaptor subunit 0.98 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_27020 hemolysin D 0.94 AO356_08685 epoxyqueuosine reductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_1232 ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE 0.93 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG low > 103
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_4902 ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE 0.95 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_24705 hemolysin D 0.93 AO353_13115 epoxyqueuosine reductase low > 101
Pseudomonas sp. RS175 0.82 PFR28_02121 Type I secretion system membrane fusion protein PrsE 0.92 PFR28_05115 Epoxyqueuosine reductase low > 88
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_3079 ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE 0.93 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_3160 Type I secretion membrane fusion protein, HlyD 0.89 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_3160 Type I secretion membrane fusion protein, HlyD 0.89 Psyr_0566 4Fe-4S cluster binding protein low > 86
Sinorhizobium meliloti 1021 0.25 SM_b21465 HlyD family protein secretion protein 0.36 SMc00406 4Fe-4S ferredoxin low > 103
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_01061 type I secretion adaptor protein RsaE 0.34 CCNA_03753 iron-sulfur cluster-binding protein low > 67
Caulobacter crescentus NA1000 0.24 CCNA_01061 type I secretion adaptor protein RsaE 0.34 CCNA_03753 iron-sulfur cluster-binding protein low > 66
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_19480 HlyD family type I secretion periplasmic adaptor subunit 0.57 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG low > 62
Shewanella loihica PV-4 0.17 Shew_0311 HlyD family type I secretion membrane fusion protein (RefSeq) 0.56 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.17 Sama_3260 HlyD family secretion protein (RefSeq) 0.54 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.16 SO4319 HlyD family secretion protein (NCBI ptt file) 0.56 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) low > 76
Magnetospirillum magneticum AMB-1 0.16 AMB_RS12005 HlyD family type I secretion periplasmic adaptor subunit 0.36 AMB_RS03995 tRNA epoxyqueuosine(34) reductase QueG low > 64
Escherichia coli Nissle 1917 0.15 ECOLIN_RS01695 HlyD family type I secretion periplasmic adaptor subunit 0.60 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG low > 55
Variovorax sp. SCN45 0.15 GFF2198 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC 0.51 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG low > 127
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS09005 type I secretion protein HlyD 0.59 HSERO_RS04220 epoxyqueuosine reductase low > 78
Rhodanobacter sp. FW510-T8 0.13 OKGIIK_05225 Membrane fusion protein (MFP) family protein 0.64 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG low > 52
Paraburkholderia graminis OAS925 0.12 ABIE53_004978 hemolysin D 0.57 ABIE53_003363 epoxyqueuosine reductase low > 113
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS20765 HlyD family type I secretion periplasmic adaptor subunit 0.53 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG low > 76
Escherichia fergusonii Becca 0.11 EFB2_00100 Hemolysin secretion protein D, chromosomal 0.60 EFB2_04369 Epoxyqueuosine reductase low > 86
Ralstonia solanacearum PSI07 0.10 RPSI07_RS01225 HlyD family type I secretion periplasmic adaptor subunit 0.53 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG low > 81
Ralstonia solanacearum UW163 0.09 UW163_RS22520 HlyD family type I secretion periplasmic adaptor subunit 0.53 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG

Not shown: 0 genomes with orthologs for PS417_13465 only; 61 genomes with orthologs for PS417_02460 only