Conservation of cofitness between PS417_16555 and PS417_24600 in Pseudomonas simiae WCS417

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16555 cupin 1.0 PS417_24600 hydrogenase 0.29 18
Pseudomonas fluorescens SBW25 0.98 PFLU_RS18595 cupin domain-containing protein 0.98 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS18595 cupin domain-containing protein 0.98 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 109
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_27720 cupin 0.90 AO353_06350 hydrogenase low > 101
Pseudomonas sp. RS175 0.91 PFR28_02622 50S ribosomal protein L16 3-hydroxylase 0.86 PFR28_03843 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase — —
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_283 FIG002776: hypothetical protein 0.79 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) — —
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_22095 cupin 0.89 AO356_15435 hydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_4045 FIG002776: hypothetical protein 0.80 Pf1N1B4_2718 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) — —
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_2636 FIG002776: hypothetical protein 0.89 PfGW456L13_1385 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_3193 Transcription factor jumonji, jmjC 0.84 Psyr_4340 phosphomethylpyrimidine kinase, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_3193 Transcription factor jumonji, jmjC 0.84 Psyr_4340 phosphomethylpyrimidine kinase, putative low > 86
Pseudomonas putida KT2440 0.84 PP_4017 conserved protein of unknown function 0.83 PP_4782 Phosphomethylpyrimidine kinase — —
Pseudomonas sp. S08-1 0.84 OH686_00190 hypothetical protein 0.81 OH686_09185 Hydroxymethylpyrimidine phosphate kinase ThiD — —
Pseudomonas stutzeri RCH2 0.82 Psest_2018 Uncharacterized conserved protein 0.77 Psest_0537 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 67
Marinobacter adhaerens HP15 0.47 HP15_2089 cupin 4 family protein 0.26 HP15_349 phosphomethylpyrimidine kinase — —
Lysobacter sp. OAE881 0.41 ABIE51_RS09000 cupin domain-containing protein 0.20 ABIE51_RS07970 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS05910 cupin domain-containing protein 0.22 ABZR86_RS00760 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_05950 roxA transcription factor 0.20 OKGIIK_03835 Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 52
Acinetobacter radioresistens SK82 0.34 MPMX26_01736 putative ribosomal oxygenase 0.36 MPMX26_02438 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase — —
Acidovorax sp. GW101-3H11 0.32 Ac3H11_282 FIG074102: hypothetical protein 0.19 Ac3H11_1063 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) — —
Escherichia coli BW25113 0.31 b1128 ycfD orf, hypothetical protein (VIMSS) 0.24 b2103 thiD phosphomethylpyrimidine kinase (NCBI) low > 76
Escherichia coli ECRC62 0.31 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 BNILDI_14330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli BL21 0.31 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.24 ECD_02031 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase low > 60
Escherichia coli ECOR38 0.31 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 HEPCGN_02760 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 85
Escherichia coli ECOR27 0.31 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 NOLOHH_15415 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 57
Escherichia fergusonii Becca 0.31 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.24 EFB2_01754 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 ECOLIN_RS12335 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.24 OHPLBJKB_01607 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 73
Escherichia coli ECRC99 0.31 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 KEDOAH_04075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC102 0.31 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 NIAGMN_22020 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC101 0.31 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 MCAODC_21085 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC101 0.31 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 OKFHMN_24075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC98 0.31 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.24 JDDGAC_28185 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS06270 cupin 0.19 RR42_RS01370 phosphomethylpyrimidine kinase — —
Enterobacter sp. TBS_079 0.30 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.23 MPMX20_03076 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 85
Klebsiella michiganensis M5al 0.30 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.23 BWI76_RS19375 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Enterobacter asburiae PDN3 0.30 EX28DRAFT_1802 Uncharacterized conserved protein 0.23 EX28DRAFT_0469 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 76
Variovorax sp. OAS795 0.30 ABID97_RS20150 cupin domain-containing protein 0.19 ABID97_RS15330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Dickeya dadantii 3937 0.30 DDA3937_RS11510 cupin domain-containing protein 0.21 DDA3937_RS15335 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3413 FIG002776: hypothetical protein 0.23 GFF3834 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 78
Dickeya dianthicola 67-19 0.30 HGI48_RS14985 cupin domain-containing protein 0.21 HGI48_RS15410 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 71
Dickeya dianthicola ME23 0.29 DZA65_RS15735 cupin domain-containing protein 0.20 DZA65_RS16235 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Erwinia tracheiphila SCR3 0.29 LU632_RS14600 cupin domain-containing protein 0.22 LU632_RS08590 thiD bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 74
Synechococcus elongatus PCC 7942 0.07 Synpcc7942_0373 hypothetical protein 0.16 Synpcc7942_2379 thiD phosphomethylpyrimidine kinase low > 38

Not shown: 8 genomes with orthologs for PS417_16555 only; 50 genomes with orthologs for PS417_24600 only