Conservation of cofitness between GFF516 and GFF4797 in Hydrogenophaga sp. GW460-11-11-14-LB1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF516 Acyl-CoA hydrolase (EC 3.1.2.20) 1.0 GFF4797 Polyhydroxyalkanoic acid synthase 0.69 8
Acidovorax sp. GW101-3H11 0.74 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) 0.68 Ac3H11_2304 Polyhydroxyalkanoic acid synthase low > 79
Variovorax sp. SCN45 0.69 GFF4599 Acyl-CoA hydrolase (EC 3.1.2.20) 0.64 GFF808 Polyhydroxyalkanoic acid synthase low > 127
Castellaniella sp019104865 MT123 0.53 ABCV34_RS09595 acyl-CoA thioesterase 0.45 ABCV34_RS01895 class I poly(R)-hydroxyalkanoic acid synthase low > 48
Ralstonia solanacearum GMI1000 0.53 RS_RS02365 acyl-CoA thioesterase 0.54 RS_RS08220 class I poly(R)-hydroxyalkanoic acid synthase low > 80
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS07500 acyl-CoA thioesterase 0.52 ABZR87_RS13300 class I poly(R)-hydroxyalkanoic acid synthase low > 80
Ralstonia solanacearum PSI07 0.53 RPSI07_RS21675 acyl-CoA thioesterase 0.54 RPSI07_RS15985 class I poly(R)-hydroxyalkanoic acid synthase low > 81
Ralstonia solanacearum UW163 0.53 UW163_RS02050 acyl-CoA thioesterase 0.54 UW163_RS14815 class I poly(R)-hydroxyalkanoic acid synthase — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS11535 acyl-CoA thioesterase 0.54 RALBFv3_RS01505 class I poly(R)-hydroxyalkanoic acid synthase low > 76
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS02095 acyl-CoA thioesterase 0.50 QEN71_RS22205 class I poly(R)-hydroxyalkanoic acid synthase low > 153
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS03270 acyl-CoA hydrolase 0.48 BPHYT_RS09145 poly-beta-hydroxybutyrate polymerase low > 109
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS19275 acyl-CoA hydrolase 0.51 HSERO_RS15040 poly(R)-hydroxyalkanoic acid synthase low > 78
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS02530 acyl-CoA hydrolase 0.50 RR42_RS07605 poly-beta-hydroxybutyrate polymerase low > 128
Dechlorosoma suillum PS 0.49 Dsui_0322 acyl-CoA hydrolase 0.48 Dsui_2537 poly(R)-hydroxyalkanoic acid synthase, class I — —
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_08560 acyl-CoA thioester hydrolase YciA 0.33 CSW01_17635 class I poly(R)-hydroxyalkanoic acid synthase low > 62
Bosea sp. OAE506 0.42 ABIE41_RS12055 acyl-CoA thioesterase 0.33 ABIE41_RS19185 class I poly(R)-hydroxyalkanoic acid synthase low > 77
Dinoroseobacter shibae DFL-12 0.40 Dshi_2218 thioesterase superfamily protein (RefSeq) 0.32 Dshi_2233 poly(R)-hydroxyalkanoic acid synthase, class I (RefSeq) low > 64
Agrobacterium fabrum C58 0.40 Atu3861 acyl-CoA hydrolase 0.31 Atu1604 poly-beta-hydroxybutyrate synthase low > 89
Rhizobium sp. OAE497 0.39 ABIE40_RS10785 acyl-CoA thioesterase 0.31 ABIE40_RS08635 class I poly(R)-hydroxyalkanoic acid synthase low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS12320 acyl-CoA thioesterase 0.34 A4249_RS05905 class I poly(R)-hydroxyalkanoic acid synthase low > 48
Magnetospirillum magneticum AMB-1 0.39 AMB_RS16945 acyl-CoA thioesterase 0.38 AMB_RS18850 class I poly(R)-hydroxyalkanoic acid synthase low > 64
Sinorhizobium meliloti 1021 0.38 SMc04228 hypothetical protein 0.31 SMc00296 POLY3-hydroxybutyrate polymerase low > 103
Marinobacter adhaerens HP15 0.36 HP15_3390 thioesterase superfamily protein 0.34 HP15_2785 polyhydroxyalkanoic acid synthase low > 73
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_11055 long-chain acyl-CoA thioester hydrolase 0.29 AO356_09470 poly(R)-hydroxyalkanoic acid synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.30 Pf6N2E2_3772 Polyhydroxyalkanoic acid synthase low > 103
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_3714 Acyl-CoA hydrolase 0.31 Ga0059261_1287 poly(R)-hydroxyalkanoic acid synthase, class I low > 68

Not shown: 38 genomes with orthologs for GFF516 only; 7 genomes with orthologs for GFF4797 only