Conservation of cofitness between GFF855 and GFF4682 in Sphingobium sp. HT1-2

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF855 Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site 1.0 GFF4682 hypothetical protein 0.62 12
Sphingomonas koreensis DSMZ 15582 0.83 Ga0059261_0546 Choline dehydrogenase and related flavoproteins 0.53 Ga0059261_0679 Protein related to penicillin acylase low > 68
Alteromonas macleodii MIT1002 0.46 MIT1002_00368 6'''-hydroxyparomomycin C oxidase 0.06 MIT1002_01642 Penicillin acylase 2 precursor low > 70
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS13220 GMC oxidoreductase 0.14 ABZR88_RS13815 penicillin acylase family protein low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1847 periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) (from data) 0.12 Echvi_4417 Protein related to penicillin acylase low > 79
Cellulophaga baltica 18 0.43 M666_RS06085 GMC family oxidoreductase 0.10 M666_RS14840 penicillin acylase family protein 0.36 46
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS15345 periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) (from data) 0.15 CA265_RS02130 penicillin acylase family protein low > 88
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS01670 GMC family oxidoreductase 0.08 ABZR86_RS21520 penicillin acylase family protein low > 74
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS18205 GMC family oxidoreductase 0.32 QEN71_RS33135 penicillin acylase family protein low > 153
Azospirillum brasilense Sp245 0.14 AZOBR_RS31645 2-keto-gluconate dehydrogenase 0.16 AZOBR_RS20060 acyl-homoserine-lactone acylase low > 97
Pseudomonas sp. BP01 0.14 JOY50_RS13450 GMC family oxidoreductase 0.10 JOY50_RS20570 penicillin acylase family protein — —
Azospirillum sp. SherDot2 0.14 MPMX19_03568 2-methyl-1,2-propanediol dehydrogenase 0.17 MPMX19_01269 Acyl-homoserine lactone acylase QuiP low > 112
Pseudomonas stutzeri RCH2 0.14 Psest_1430 Choline dehydrogenase and related flavoproteins 0.10 Psest_2638 Protein related to penicillin acylase low > 67
Ralstonia sp. UNC404CL21Col 0.13 ABZR87_RS09160 GMC family oxidoreductase 0.31 ABZR87_RS19125 penicillin acylase family protein low > 80
Rhodanobacter sp000427505 FW510-R12 0.13 LRK53_RS00340 GMC family oxidoreductase 0.08 LRK53_RS14240 penicillin acylase family protein low > 59
Ralstonia solanacearum PSI07 0.12 RPSI07_RS20130 GMC family oxidoreductase 0.31 RPSI07_RS05440 penicillin acylase family protein low > 81
Rhodanobacter sp. FW510-T8 0.12 OKGIIK_14905 Choline dehydrogenase 0.08 OKGIIK_03190 Peptidase S45 low > 53
Shewanella loihica PV-4 0.12 Shew_2982 glucose-methanol-choline oxidoreductase (RefSeq) 0.06 Shew_2669 penicillin amidase (RefSeq) low > 60
Rhodanobacter denitrificans MT42 0.12 LRK55_RS07830 GMC family oxidoreductase 0.08 LRK55_RS14040 penicillin acylase family protein low > 63
Dinoroseobacter shibae DFL-12 0.12 Dshi_2072 Gluconate 2-dehydrogenase (acceptor) (RefSeq) 0.13 Dshi_1565 peptidase S45 penicillin amidase (RefSeq) — —
Rhodanobacter denitrificans FW104-10B01 0.12 LRK54_RS08080 GMC family oxidoreductase 0.08 LRK54_RS14320 penicillin acylase family protein low > 59
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_4406 2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, flavoprotein 0.10 Pf6N2E2_4519 Penicillin acylase II (EC 3.5.1.11) low > 103
Pseudomonas putida KT2440 0.11 PP_3383 gluconate 2-dehydrogenase flavoprotein subunit 0.10 PP_5164 Penicillin amidase family protein low > 96
Pseudomonas aeruginosa MRSN321 0.11 DY961_RS17710 GMC family oxidoreductase 0.16 DY961_RS21215 penicillin acylase family protein low > 100
Pseudomonas aeruginosa PUPa3 0.11 DQ20_RS39935 GMC family oxidoreductase 0.16 DQ20_RS55285 penicillin acylase family protein low > 101
Pseudomonas aeruginosa PA14 0.11 IKLFDK_11115 GMC family oxidoreductase 0.16 IKLFDK_09240 penicillin acylase family protein low > 98
Pseudomonas lactucae CFBP13502 0.10 GEMAOFIL_00257 Gluconate 2-dehydrogenase flavoprotein 0.10 GEMAOFIL_05556 Acyl-homoserine lactone acylase QuiP low > 96
Pseudomonas orientalis W4I3 0.10 QF045_RS03210 GMC family oxidoreductase 0.10 QF045_RS01465 penicillin acylase family protein low > 93
Pseudomonas fluorescens SBW25 0.10 PFLU_RS00260 GMC family oxidoreductase 0.10 PFLU_RS28740 penicillin acylase family protein low > 109
Pseudomonas simiae WCS417 0.10 PS417_00265 GMC family oxidoreductase 0.09 PS417_27080 penicillin amidase low > 88
Pseudomonas fluorescens SBW25-INTG 0.10 PFLU_RS00260 GMC family oxidoreductase 0.10 PFLU_RS28740 penicillin acylase family protein low > 109
Dickeya dadantii 3937 0.10 DDA3937_RS03330 GMC family oxidoreductase 0.07 DDA3937_RS12365 penicillin acylase family protein low > 74
Pseudomonas sp. DMC3 0.10 GFF658 Gluconate 2-dehydrogenase flavoprotein 0.09 GFF2150 Acyl-homoserine lactone acylase QuiP low > 89
Pseudomonas fluorescens FW300-N2E3 0.10 AO353_10795 GMC family oxidoreductase 0.10 AO353_16975 acyl-homoserine lactone acylase subunit beta low > 101
Variovorax sp. SCN45 0.09 GFF6453 Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein 0.29 GFF4783 Penicillin acylase (EC 3.5.1.11) low > 127
Pseudomonas fluorescens FW300-N2C3 0.09 AO356_10655 dehydrogenase 0.13 AO356_16310 penicillin amidase low > 104
Dickeya dianthicola ME23 0.09 DZA65_RS11280 GMC family oxidoreductase 0.07 DZA65_RS12890 penicillin acylase family protein low > 75
Dickeya dianthicola 67-19 0.09 HGI48_RS10815 GMC family oxidoreductase 0.07 HGI48_RS12445 penicillin acylase family protein low > 71

Not shown: 16 genomes with orthologs for GFF855 only; 16 genomes with orthologs for GFF4682 only