Conservation of cofitness between PS417_20155 and PS417_23830 in Pseudomonas simiae WCS417

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20155 23S rRNA methyltransferase 1.0 PS417_23830 hypothetical protein 0.24 16
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.97 PFLU_RS25670 bifunctional aminoglycoside phosphotransferase/ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.94 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.97 PFLU_RS25670 bifunctional aminoglycoside phosphotransferase/ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.86 Pf1N1B4_2872 FIG00955330: hypothetical protein 0.57 24
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.86 Pf6N2E2_5170 FIG00955330: hypothetical protein 0.42 7
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_19055 23S rRNA methyltransferase 0.85 AO356_16145 hypothetical protein low > 104
Pseudomonas sp. RS175 0.84 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.85 PFR28_03704 hypothetical protein 0.80 2
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.86 PfGW456L13_1534 FIG00955330: hypothetical protein 0.50 3
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_02715 23S rRNA methyltransferase 0.86 AO353_14470 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.87 Psyr_4308 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.87 Psyr_4308 conserved hypothetical protein low > 86
Pseudomonas sp. S08-1 0.73 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.70 OH686_08155 hypothetical protein low > 80
Pseudomonas putida KT2440 0.69 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.79 PP_4684 conserved protein of unknown function with kinase-like domain low > 96
Pseudomonas stutzeri RCH2 0.67 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.66 Psest_1031 Uncharacterized protein conserved in bacteria low > 67
Marinobacter adhaerens HP15 0.40 HP15_790 23S rRNA 5-methyluridine methyltransferase 0.48 HP15_336 conserved hypothetical protein low > 73
Castellaniella sp019104865 MT123 0.33 ABCV34_RS03050 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.20 ABCV34_RS05515 AAA family ATPase low > 48
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS13170 23S rRNA methyltransferase 0.29 RR42_RS09570 hypothetical protein low > 128
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS10885 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.29 ABZR87_RS20000 bifunctional aminoglycoside phosphotransferase/ATP-binding protein low > 80
Variovorax sp. SCN45 0.29 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) 0.32 GFF7237 hypothetical protein low > 127
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_0241 rumA 23S rRNA (uracil-5-)-methyltransferase RumA 0.27 Synpcc7942_0148 hypothetical protein low > 38
Magnetospirillum magneticum AMB-1 0.17 AMB_RS01660 class I SAM-dependent RNA methyltransferase 0.23 AMB_RS07720 hypothetical protein low > 64
Rhodopseudomonas palustris CGA009 0.15 TX73_004885 methyltransferase 0.20 TX73_021980 AAA family ATPase low > 86
Azospirillum sp. SherDot2 0.15 MPMX19_02196 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.19 MPMX19_05958 hypothetical protein low > 112
Bosea sp. OAE506 0.15 ABIE41_RS22255 RNA methyltransferase 0.21 ABIE41_RS15460 AAA family ATPase low > 77
Caulobacter crescentus NA1000 0.14 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.20 CCNA_00968 gluconate kinase low > 66
Caulobacter crescentus NA1000 Δfur 0.14 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.20 CCNA_00968 gluconate kinase low > 67
Rhodospirillum rubrum S1H 0.12 Rru_A2107 23S rRNA (uracil-5-)-methyltransferase RumA (NCBI) 0.17 Rru_A2613 hypothetical protein (NCBI) — —
Mycobacterium tuberculosis H37Rv 0.10 Rv2689c Conserved alanine and valine and glycine rich protein 0.15 Rv2004c Conserved protein low > 58

Not shown: 71 genomes with orthologs for PS417_20155 only; 0 genomes with orthologs for PS417_23830 only