Conservation of cofitness between GFF4870 and GFF4409 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4870 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway 1.0 GFF4409 YbbM seven transmembrane helix protein 0.38 13
Escherichia fergusonii Becca 0.95 EFB2_01105 tRNA threonylcarbamoyladenosine dehydratase 0.88 EFB2_03564 putative iron export permease protein FetB low > 86
Escherichia coli ECOR38 0.95 HEPCGN_19350 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 HEPCGN_06625 fetB iron export ABC transporter permease subunit FetB low > 87
Escherichia coli BW25113 0.95 b2812 ygdL hypothetical protein (NCBI) 0.88 b0491 ybbM putative metal resistance protein (VIMSS) low > 76
Escherichia coli BL21 0.95 ECD_02663 tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA 0.88 ECD_00442 iron export ABC transporter permease; peroxide resistance protein low > 61
Escherichia coli ECOR27 0.95 NOLOHH_11975 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 NOLOHH_00980 fetB iron export ABC transporter permease subunit FetB 0.44 69
Escherichia coli ECRC62 0.95 BNILDI_10480 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 BNILDI_22400 fetB iron export ABC transporter permease subunit FetB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_00919 tRNA threonylcarbamoyladenosine dehydratase 0.88 OHPLBJKB_03183 putative iron export permease protein FetB low > 73
Escherichia coli ECRC99 0.93 KEDOAH_08035 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 KEDOAH_19980 fetB iron export ABC transporter permease subunit FetB
Escherichia coli ECRC102 0.93 NIAGMN_17865 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 NIAGMN_06040 fetB iron export ABC transporter permease subunit FetB
Escherichia coli ECRC100 0.93 OKFHMN_20095 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 OKFHMN_07990 fetB iron export ABC transporter permease subunit FetB low > 80
Escherichia coli ECRC101 0.93 MCAODC_10620 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 MCAODC_27205 fetB iron export ABC transporter permease subunit FetB low > 87
Escherichia coli ECRC98 0.93 JDDGAC_23760 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.88 JDDGAC_11635 fetB iron export ABC transporter permease subunit FetB low > 86
Enterobacter sp. TBS_079 0.89 MPMX20_03675 tRNA threonylcarbamoyladenosine dehydratase 0.89 MPMX20_01089 putative iron export permease protein FetB low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2888 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 0.87 EX28DRAFT_2468 TIGR00245 family protein low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS22975 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.87 BWI76_RS06930 iron export ABC transporter permease subunit FetB low > 92
Rahnella sp. WP5 0.84 EX31_RS13130 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.69 EX31_RS06985 iron export ABC transporter permease subunit FetB low > 89
Serratia liquefaciens MT49 0.84 IAI46_20360 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.86 IAI46_24035 iron export ABC transporter permease subunit FetB low > 86
Pantoea sp. MT58 0.83 IAI47_04005 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.66 IAI47_19870 iron export ABC transporter permease subunit FetB low > 76
Shewanella loihica PV-4 0.61 Shew_3251 UBA/THIF-type NAD/FAD binding protein (RefSeq) 0.19 Shew_0630 hypothetical protein (RefSeq) low > 60
Marinobacter adhaerens HP15 0.57 HP15_266 UBA/THIF-type NAD/FAD binding protein 0.21 HP15_3395 conserved hypothetical protein CHP00245 low > 73
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS02715 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.29 QEN71_RS22120 iron export ABC transporter permease subunit FetB low > 153
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04134 tRNA A37 threonylcarbamoyladenosine dehydratase 0.28 H281DRAFT_00869 putative ABC transport system permease protein low > 103
Ralstonia solanacearum GMI1000 0.51 RS_RS03895 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.25 RS_RS03770 iron export ABC transporter permease subunit FetB low > 80
Paraburkholderia graminis OAS925 0.51 ABIE53_003371 tRNA A37 threonylcarbamoyladenosine dehydratase 0.29 ABIE53_002085 putative ABC transport system permease protein low > 113
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS15990 heme biosynthesis protein HemY 0.28 BPHYT_RS09240 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.25 PFLU_RS19595 iron export ABC transporter permease subunit FetB low > 109
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.25 PFLU_RS19595 iron export ABC transporter permease subunit FetB low > 109
Pseudomonas simiae WCS417 0.51 PS417_06165 thiamine biosynthesis protein ThiF 0.24 PS417_17980 ABC transporter permease low > 88
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS09175 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.26 ABZR87_RS09060 iron export ABC transporter permease subunit FetB low > 80
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0922 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 0.18 B158DRAFT_1302 ABC-type uncharacterized transport system, permease component low > 40
Ralstonia solanacearum UW163 0.47 UW163_RS00465 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.27 UW163_RS00580 iron export ABC transporter permease subunit FetB
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS13100 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.27 RALBFv3_RS12985 iron export ABC transporter permease subunit FetB low > 76
Ralstonia solanacearum PSI07 0.46 RPSI07_RS20115 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.27 RPSI07_RS20240 iron export ABC transporter permease subunit FetB low > 81
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS15305 heme biosynthesis protein HemY 0.17 RR42_RS30340 ABC transporter permease low > 128
Variovorax sp. SCN45 0.33 GFF289 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 0.18 GFF5865 Probable iron export permease protein FetB low > 127
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS00200 tRNA threonylcarbamoyladenosine dehydratase 0.17 HMPREF1058_RS03930 ABC transporter permease low > 67
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS01100 tRNA threonylcarbamoyladenosine dehydratase 0.19 ABI39_RS17295 ABC transporter permease low > 72
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS03125 tRNA threonylcarbamoyladenosine dehydratase 0.17 HMPREF1181_RS14265 ABC transporter permease low > 56
Bacteroides thetaiotaomicron VPI-5482 0.23 BT3639 ThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis (NCBI ptt file) 0.16 BT0879 ABC transporter, permease protein (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.22 BACOVA_03472 ThiF family protein 0.19 BACOVA_02598 conserved hypothetical protein TIGR00245 low > 94

Not shown: 36 genomes with orthologs for GFF4870 only; 6 genomes with orthologs for GFF4409 only