Conservation of cofitness between GFF1569 and GFF4202 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1569 CsiR, transcriptional repressor of CsiD 1.0 GFF4202 Thiazole biosynthesis protein ThiG 0.42 10
Klebsiella pneumoniae MKP103 0.87 KDGMDA_13820 DNA-binding transcriptional regulator CsiR 0.91 KDGMDA_10020 thiazole synthase low > 95
Escherichia coli ECRC102 0.86 NIAGMN_18665 csiR DNA-binding transcriptional regulator CsiR 0.92 NIAGMN_11145 thiG thiazole synthase low > 80
Escherichia coli ECRC100 0.86 OKFHMN_20900 csiR DNA-binding transcriptional regulator CsiR 0.92 OKFHMN_13395 thiG thiazole synthase low > 79
Escherichia coli BL21 0.86 ECD_02520 transcriptional repressor of csiD 0.92 ECD_03867 thiamine biosynthesis ThiGH complex subunit low > 61
Escherichia coli ECRC62 0.86 BNILDI_11285 csiR DNA-binding transcriptional regulator CsiR 0.93 BNILDI_05985 thiG thiazole synthase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_01068 hypothetical protein 0.93 OHPLBJKB_04060 Thiazole synthase low > 74
Escherichia coli ECRC99 0.86 KEDOAH_07240 csiR DNA-binding transcriptional regulator CsiR 0.92 KEDOAH_14765 thiG thiazole synthase — —
Escherichia coli BW25113 0.86 b2664 ygaE putative transcriptional regulator (VIMSS) 0.93 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) low > 76
Escherichia coli ECRC98 0.86 JDDGAC_24560 csiR DNA-binding transcriptional regulator CsiR 0.92 JDDGAC_17020 thiG thiazole synthase low > 87
Escherichia coli ECRC101 0.86 MCAODC_11420 csiR DNA-binding transcriptional regulator CsiR 0.92 MCAODC_03895 thiG thiazole synthase low > 88
Escherichia coli ECOR27 0.86 NOLOHH_12725 csiR DNA-binding transcriptional regulator CsiR 0.93 NOLOHH_05540 thiG thiazole synthase low > 76
Escherichia coli ECOR38 0.86 HEPCGN_20165 csiR DNA-binding transcriptional regulator CsiR 0.92 HEPCGN_12030 thiG thiazole synthase 0.49 8
Escherichia fergusonii Becca 0.86 EFB2_01266 HTH-type transcriptional repressor GlaR 0.92 EFB2_04621 Thiazole synthase low > 86
Escherichia coli Nissle 1917 0.86 ECOLIN_RS14855 DNA-binding transcriptional regulator CsiR 0.91 ECOLIN_RS23020 thiazole synthase low > 55
Pseudomonas sp. BP01 0.58 JOY50_RS27370 csiR DNA-binding transcriptional regulator CsiR 0.37 JOY50_RS20860 thiazole synthase low > 84
Pseudomonas putida KT2440 0.58 PP_2908 DNA-binding transcriptional repressor 0.38 PP_5104 thiazole synthase 0.21 41
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_24300 transcriptional regulator 0.39 AO353_08215 thiazole synthase low > 101
Rhodopseudomonas palustris CGA009 0.28 TX73_017825 FCD domain-containing protein 0.38 TX73_018530 thiazole synthase — —
Serratia liquefaciens MT49 0.28 IAI46_12455 FCD domain-containing protein 0.75 IAI46_01300 thiazole synthase low > 86
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_29960 GntR family transcriptional regulator 0.38 AO356_13375 thiazole synthase — —
Variovorax sp. OAS795 0.26 ABID97_RS29370 FCD domain-containing protein 0.36 ABID97_RS15315 thiazole synthase — —
Variovorax sp. SCN45 0.24 GFF1053 no description 0.35 GFF1188 Thiazole synthase (EC 2.8.1.10) low > 127
Bosea sp. OAE506 0.23 ABIE41_RS20215 GntR family transcriptional regulator 0.36 ABIE41_RS20185 thiazole synthase — —
Dinoroseobacter shibae DFL-12 0.22 Dshi_0960 transcriptional regulator, GntR family (RefSeq) 0.33 Dshi_0912 thiazole biosynthesis family protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.21 PGA1_c28300 transcriptional regulator, GntR family 0.32 PGA1_c09070 thiazole biosynthesis protein ThiG low > 62
Xanthobacter sp. DMC5 0.20 GFF2871 HTH-type transcriptional repressor GlaR 0.45 GFF2432 Thiazole synthase — —
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_04362 HTH-type transcriptional repressor GlaR 0.39 GEMAOFIL_05492 Thiazole synthase low > 93
Pseudomonas simiae WCS417 0.18 PS417_21085 GntR family transcriptional regulator 0.39 PS417_26775 thiazole synthase 0.18 11
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_2084 transcriptional regulator, GntR family 0.39 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_2084 transcriptional regulator, GntR family 0.39 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas stutzeri RCH2 0.18 Psest_2322 Transcriptional regulators 0.40 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis low > 67
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS22695 GntR family transcriptional regulator 0.39 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS22695 GntR family transcriptional regulator 0.39 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas sp. SVBP6 0.17 COO64_RS09895 GntR family transcriptional regulator 0.39 COO64_RS12950 thiazole synthase low > 93
Pseudomonas sp. S08-1 0.17 OH686_01695 Propionate catabolism operon transcriptional regulator of GntR family 0.39 OH686_14285 Thiazole synthase low > 80
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_3818 Propionate catabolism operon transcriptional regulator of GntR family [predicted] 0.38 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas sp. DMC3 0.17 GFF5229 HTH-type transcriptional repressor GlaR 0.40 GFF219 Thiazole synthase low > 89
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_6060 Propionate catabolism operon transcriptional regulator of GntR family [predicted] 0.38 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG low > 103
Pseudomonas aeruginosa PA14 0.17 IKLFDK_03450 GntR family transcriptional regulator 0.40 IKLFDK_23520 Thiazole synthase low > 100
Pseudomonas sp. RS175 0.17 PFR28_02929 HTH-type transcriptional repressor GlaR 0.38 PFR28_04252 Thiazole synthase low > 88
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_4119 Propionate catabolism operon transcriptional regulator of GntR family [predicted] 0.40 PfGW456L13_1000 Thiazole biosynthesis protein ThiG low > 87
Castellaniella sp019104865 MT123 0.15 ABCV34_RS13490 GntR family transcriptional regulator 0.40 ABCV34_RS14510 thiazole synthase — —
Burkholderia phytofirmans PsJN 0.15 BPHYT_RS07325 GntR family transcriptional regulator 0.36 BPHYT_RS17775 thiazole synthase — —
Shewanella loihica PV-4 0.15 Shew_0280 GntR family transcriptional regulator (RefSeq) 0.61 Shew_2092 thiazole biosynthesis family protein (RefSeq) low > 60

Not shown: 0 genomes with orthologs for GFF1569 only; 66 genomes with orthologs for GFF4202 only