Conservation of cofitness between GFF670 and GFF4068 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 1.0 GFF4068 IcmF-related protein 0.63 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.08 OHPLBJKB_03439 hypothetical protein low > 73
Escherichia coli ECOR27 0.87 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.07 NOLOHH_02275 tssM type VI secretion system membrane subunit TssM low > 57
Escherichia coli ECRC101 0.86 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 OKFHMN_09920 tssM type VI secretion system membrane subunit TssM — —
Escherichia coli ECRC101 0.86 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 MCAODC_00435 tssM type VI secretion system membrane subunit TssM — —
Escherichia coli ECRC99 0.86 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 KEDOAH_18235 tssM type VI secretion system membrane subunit TssM — —
Escherichia coli ECRC102 0.86 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 NIAGMN_07770 tssM type VI secretion system membrane subunit TssM — —
Escherichia fergusonii Becca 0.86 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.07 EFB2_03823 hypothetical protein low > 86
Escherichia coli ECRC98 0.86 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 JDDGAC_13515 tssM type VI secretion system membrane subunit TssM — —
Enterobacter sp. TBS_079 0.85 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.21 MPMX20_02678 hypothetical protein 0.21 69
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.21 EX28DRAFT_0790 type VI secretion protein IcmF low > 76
Dickeya dadantii 3937 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.09 DDA3937_RS07080 type VI secretion system membrane subunit TssM low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.09 HGI48_RS08010 type VI secretion system membrane subunit TssM low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.09 DZA65_RS08605 type VI secretion system membrane subunit TssM low > 75
Pectobacterium carotovorum WPP14 0.75 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.08 HER17_RS04905 type VI secretion system membrane subunit TssM low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 LU632_RS00740 tssM type VI secretion system membrane subunit TssM — —
Pantoea sp. MT58 0.72 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.20 IAI47_11680 type VI secretion system membrane subunit TssM low > 76
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.11 CSW01_14615 type VI secretion system membrane subunit TssM low > 62
Acinetobacter radioresistens SK82 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.10 MPMX26_00969 hypothetical protein low > 36
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.18 Pf1N1B4_2070 IcmF-related protein low > 87
Pseudomonas sp. RS175 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.17 PFR28_04450 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.17 AO353_09545 type VI secretion protein IcmF low > 101
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.17 AO356_12315 type VI secretion protein IcmF low > 104
Pseudomonas sp. S08-1 0.34 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.12 OH686_12780 T6SS component TssM (IcmF/VasK) low > 80
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.17 Pf6N2E2_4341 IcmF-related protein low > 103
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.09 HP15_3463 type VI secretion protein IcmF low > 73
Pseudomonas putida KT2440 0.33 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.08 PP_4071 conserved membrane protein of unknown function low > 96
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.18 PFLU_RS29600 type VI secretion system membrane subunit TssM low > 109
Pseudomonas stutzeri RCH2 0.33 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.11 Psest_4246 type VI secretion protein IcmF low > 67
Pseudomonas simiae WCS417 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.18 PS417_27920 type VI secretion protein IcmF low > 88
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.18 PFLU_RS29600 type VI secretion system membrane subunit TssM low > 109
Variovorax sp. SCN45 0.31 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.25 GFF6352 T6SS component TssM (IcmF/VasK) low > 127
Agrobacterium fabrum C58 0.30 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.15 Atu4332 IcmF family protein low > 89
Paraburkholderia graminis OAS925 0.30 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.13 ABIE53_003925 type VI secretion system protein ImpL low > 113
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.09 H281DRAFT_05373 type VI secretion system protein ImpL low > 103
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.39 ABZR87_RS13865 type VI secretion system membrane subunit TssM low > 80
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.42 BPHYT_RS04540 type VI secretion protein VasK low > 109
Variovorax sp. OAS795 0.29 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.40 ABID97_RS09000 type VI secretion system membrane subunit TssM low > 91
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.41 QEN71_RS34515 type VI secretion system membrane subunit TssM — —
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase 0.09 HSERO_RS03785 type VI secretion protein VasK low > 78
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.43 RR42_RS03585 type VI secretion protein VasK low > 128

Not shown: 55 genomes with orthologs for GFF670 only; 1 genomes with orthologs for GFF4068 only