Conservation of cofitness between PS417_04535 and PS417_20180 in Pseudomonas simiae WCS417

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04535 lysine transporter LysE 1.0 PS417_20180 agmatinase 0.17 12
Pseudomonas fluorescens SBW25 1.00 PFLU_RS04580 lysine transporter LysE 0.99 PFLU_RS22120 agmatinase low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS04580 lysine transporter LysE 0.99 PFLU_RS22120 agmatinase low > 109
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_3245 L-lysine permease 0.96 Pf6N2E2_2655 Agmatinase (EC 3.5.3.11) low > 103
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_1618 L-lysine permease 0.94 PfGW456L13_4435 Agmatinase (EC 3.5.3.11) low > 87
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_2955 L-lysine permease 0.95 Pf1N1B4_525 Agmatinase (EC 3.5.3.11) low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_06930 lysine transporter LysE 0.96 AO356_04095 agmatinase low > 104
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_15005 lysine transporter LysE 0.97 AO353_18400 agmatinase low > 101
Pseudomonas sp. RS175 0.91 PFR28_03621 Threonine efflux protein 0.96 PFR28_00778 Guanidinobutyrase low > 88
Pseudomonas sp. S08-1 0.83 OH686_06335 L-lysine permease 0.88 OH686_11355 agmatinase low > 80
Sinorhizobium meliloti 1021 0.46 SMc02484 amino acid efflux transmembrane protein 0.38 SMc01967 agmatinase low > 103
Agrobacterium fabrum C58 0.46 Atu2633 RhtB family transporter 0.28 Atu1245 agmatinase low > 89
Serratia liquefaciens MT49 0.43 IAI46_09000 LysE family transporter 0.74 IAI46_08235 agmatinase low > 86
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS21510 lysine transporter LysE 0.72 RR42_RS02455 agmatinase low > 128
Pseudomonas putida KT2440 0.35 PP_0699 Transporter, LysE family 0.94 PP_4523 putative Agmatinase 0.13 39
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS21900 LysE family transporter 0.74 ABZR87_RS16040 agmatinase low > 80
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_01025 LysE family translocator 0.32 CSW01_18230 agmatinase low > 62
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein 0.27 EX28DRAFT_2977 agmatinase low > 76
Escherichia coli ECRC102 0.26 NIAGMN_12110 rhtC threonine export protein RhtC 0.27 NIAGMN_17080 speB agmatinase — —
Escherichia coli ECRC101 0.26 OKFHMN_14355 rhtC threonine export protein RhtC 0.27 OKFHMN_19315 speB agmatinase — —
Escherichia coli ECRC62 0.26 BNILDI_05045 rhtC threonine export protein RhtC 0.27 BNILDI_09765 speB agmatinase — —
Escherichia coli ECOR27 0.26 NOLOHH_06485 rhtC threonine export protein RhtC 0.27 NOLOHH_11185 speB agmatinase low > 57
Escherichia coli ECRC98 0.26 JDDGAC_17980 rhtC threonine export protein RhtC 0.27 JDDGAC_22945 speB agmatinase — —
Escherichia coli ECOR38 0.26 HEPCGN_13055 rhtC threonine export protein RhtC 0.27 HEPCGN_18620 speB agmatinase low > 85
Escherichia coli ECRC101 0.26 MCAODC_04860 rhtC threonine export protein RhtC 0.27 MCAODC_09835 speB agmatinase — —
Escherichia coli BW25113 0.26 b3823 rhtC threonine efflux system (NCBI) 0.27 b2937 speB agmatinase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_04228 Threonine efflux protein 0.27 OHPLBJKB_00779 Agmatinase low > 73
Escherichia coli ECRC99 0.26 KEDOAH_13795 rhtC threonine export protein RhtC 0.27 KEDOAH_08825 speB agmatinase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF249 L-lysine permease 0.27 GFF3030 Agmatinase (EC 3.5.3.11) low > 78
Escherichia coli BL21 0.25 ECD_03702 threonine efflux pump 0.27 ECD_02767 agmatinase low > 60
Escherichia coli Nissle 1917 0.25 ECOLIN_RS21940 threonine export protein RhtC 0.27 ECOLIN_RS16340 agmatinase low > 52
Escherichia fergusonii Becca 0.25 EFB2_04814 Threonine efflux protein 0.27 EFB2_00964 Agmatinase low > 86
Klebsiella michiganensis M5al 0.25 BWI76_RS01250 threonine export protein RhtC 0.79 BWI76_RS21880 agmatinase low > 92
Shewanella loihica PV-4 0.24 Shew_1462 lysine exporter protein LysE/YggA (RefSeq) 0.30 Shew_1621 agmatinase (RefSeq) — —
Enterobacter sp. TBS_079 0.24 MPMX20_04457 Threonine efflux protein 0.27 MPMX20_03798 Agmatinase low > 85
Pantoea sp. MT58 0.23 IAI47_18355 threonine export protein RhtC 0.28 IAI47_03665 agmatinase low > 76
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS19300 threonine transporter 0.73 HSERO_RS08555 agmatinase low > 78
Dinoroseobacter shibae DFL-12 0.18 Dshi_1792 Lysine exporter protein (LYSE/YGGA) (RefSeq) 0.30 Dshi_1735 putative agmatinase (RefSeq) low > 64

Not shown: 17 genomes with orthologs for PS417_04535 only; 16 genomes with orthologs for PS417_20180 only