Conservation of cofitness between Psest_3927 and Psest_3843 in Pseudomonas stutzeri RCH2

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3927 thiazole biosynthesis/tRNA modification protein ThiI 1.0 Psest_3843 4-hydroxybenzoate synthetase (chorismate lyase) 0.34 12
Pseudomonas sp. RS175 0.83 PFR28_04950 tRNA sulfurtransferase 0.52 PFR28_04476 Chorismate pyruvate-lyase — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_12175 tRNA s(4)U8 sulfurtransferase 0.53 AO353_09840 chorismate--pyruvate lyase — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_3819 Thiamine biosynthesis protein thiI 0.54 Pf6N2E2_4063 Chorismate--pyruvate lyase (EC 4.1.3.40) — —
Pseudomonas fluorescens SBW25 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.51 PFLU_RS29710 chorismate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS01715 tRNA 4-thiouridine(8) synthase ThiI 0.51 PFLU_RS29710 chorismate lyase — —
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_09700 tRNA s(4)U8 sulfurtransferase 0.54 AO356_10985 chorismate--pyruvate lyase — —
Pseudomonas simiae WCS417 0.82 PS417_01660 tRNA s(4)U8 sulfurtransferase 0.51 PS417_28020 chorismate--pyruvate lyase — —
Pseudomonas putida KT2440 0.81 PP_5045 tRNA sulfurtransferase 0.54 PP_5317 Probable chorismate pyruvate-lyase low > 96
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.54 Psyr_5030 chorismate lyase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_4816 [ThiS-adenylate] sulfurtransferase 0.54 Psyr_5030 chorismate lyase — —
Pseudomonas sp. S08-1 0.79 OH686_10615 tRNA 4-thiouridine synthase / Rhodanese-like domain required for thiamine synthesis 0.56 OH686_13475 Chorismate--pyruvate lyase low > 80
Shewanella loihica PV-4 0.52 Shew_2766 thiamine biosynthesis protein ThiI (RefSeq) 0.24 Shew_3743 chorismate lyase (RefSeq) low > 60
Escherichia coli ECRC98 0.52 JDDGAC_12060 thiI tRNA sulfurtransferase 0.20 JDDGAC_16710 ubiC chorismate lyase — —
Escherichia coli ECRC101 0.52 MCAODC_27630 thiI tRNA sulfurtransferase 0.20 MCAODC_03585 ubiC chorismate lyase — —
Escherichia coli ECRC99 0.52 KEDOAH_19560 thiI tRNA sulfurtransferase 0.20 KEDOAH_15075 ubiC chorismate lyase — —
Escherichia coli ECRC102 0.52 NIAGMN_06460 thiI tRNA sulfurtransferase 0.20 NIAGMN_10835 ubiC chorismate lyase — —
Escherichia coli ECRC101 0.52 OKFHMN_08405 thiI tRNA sulfurtransferase 0.20 OKFHMN_13085 ubiC chorismate lyase — —
Shewanella sp. ANA-3 0.52 Shewana3_2896 thiamine biosynthesis protein ThiI (RefSeq) 0.23 Shewana3_0125 chorismate lyase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.51 SO1531 thiI thiamine biosynthesis protein ThiI (NCBI ptt file) 0.22 SO0131 hypothetical chorismate pyruvate lyase (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.51 DZA65_RS05930 tRNA 4-thiouridine(8) synthase ThiI 0.19 DZA65_RS02870 chorismate lyase low > 75
Erwinia tracheiphila SCR3 0.51 LU632_RS18845 thiI tRNA 4-thiouridine(8) synthase ThiI 0.19 LU632_RS22335 ubiC chorismate lyase low > 74
Dickeya dadantii 3937 0.51 DDA3937_RS05545 tRNA 4-thiouridine(8) synthase ThiI 0.18 DDA3937_RS02740 chorismate lyase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF4327 tRNA S(4)U 4-thiouridine synthase (former ThiI) / Rhodanese-like domain required for thiamine synthesis 0.20 GFF1408 Chorismate--pyruvate lyase (EC 4.1.3.40) low > 78
Escherichia fergusonii Becca 0.51 EFB2_03634 tRNA sulfurtransferase 0.20 EFB2_04564 Chorismate pyruvate-lyase low > 86
Dickeya dianthicola 67-19 0.51 HGI48_RS05605 tRNA 4-thiouridine(8) synthase ThiI 0.19 HGI48_RS02715 chorismate lyase low > 71
Shewanella amazonensis SB2B 0.51 Sama_2431 thiamine biosynthesis protein ThiI (RefSeq) 0.23 Sama_3623 putative chorismate--pyruvate lyase (RefSeq) — —
Serratia liquefaciens MT49 0.51 IAI46_04940 tRNA 4-thiouridine(8) synthase ThiI 0.20 IAI46_23025 chorismate lyase low > 86
Escherichia coli ECRC62 0.51 BNILDI_22770 thiI tRNA sulfurtransferase 0.20 BNILDI_06280 ubiC chorismate lyase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03253 tRNA sulfurtransferase 0.21 OHPLBJKB_04004 Chorismate pyruvate-lyase low > 73
Escherichia coli ECOR27 0.50 NOLOHH_01355 thiI tRNA sulfurtransferase 0.21 NOLOHH_05240 ubiC chorismate lyase low > 57
Escherichia coli BL21 0.50 ECD_00371 tRNA s(4)U8 sulfurtransferase 0.21 ECD_03911 chorismate--pyruvate lyase 0.71 22
Klebsiella michiganensis M5al 0.50 BWI76_RS06395 tRNA 4-thiouridine(8) synthase ThiI 0.20 BWI76_RS01855 chorismate lyase low > 92
Escherichia coli BW25113 0.50 b0423 thiI thiamine biosynthesis protein ThiI (NCBI) 0.21 b4039 ubiC chorismate lyase (VIMSS) low > 76
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02550 tRNA uracil 4-sulfurtransferase ThiI 0.20 ECOLIN_RS23315 chorismate lyase low > 52
Escherichia coli ECOR38 0.50 HEPCGN_07035 thiI tRNA sulfurtransferase 0.21 HEPCGN_11605 ubiC chorismate lyase low > 85
Rahnella sp. WP5 0.50 EX31_RS22170 tRNA 4-thiouridine(8) synthase ThiI 0.18 EX31_RS11825 chorismate lyase low > 89
Pantoea sp. MT58 0.50 IAI47_14725 tRNA 4-thiouridine(8) synthase ThiI 0.20 IAI47_17910 chorismate lyase low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_01014 tRNA sulfurtransferase 0.20 MPMX20_00255 Chorismate pyruvate-lyase low > 85
Marinobacter adhaerens HP15 0.49 HP15_3407 thiamine biosynthesis protein 0.26 HP15_3352 chorismate-pyruvate lyase low > 73

Not shown: 5 genomes with orthologs for Psest_3927 only; 3 genomes with orthologs for Psest_3843 only