| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF1652 | | tRNA (5-methoxyuridine) 34 synthase | 1.0 | GFF3644 | | Electron transport complex protein RnfD | 0.42 | 8 |
| Escherichia coli BL21 | 0.94 | ECD_01842 | | tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent | 0.90 | ECD_01600 | | SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex | — | — |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_04630 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.89 | HEPCGN_05925 | rsxD | electron transport complex subunit RsxD | 0.87 | 16 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_01857 | | tRNA U34 carboxymethyltransferase | 0.90 | OHPLBJKB_02096 | | Electron transport complex subunit RsxD | low | > 73 |
| Escherichia coli ECRC62 | 0.94 | BNILDI_15455 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | BNILDI_16850 | rsxD | electron transport complex subunit RsxD | low | > 75 |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_01885 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | KEDOAH_00565 | rsxD | electron transport complex subunit RsxD | — | — |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_01840 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | NIAGMN_00525 | rsxD | electron transport complex subunit RsxD | — | — |
| Escherichia coli ECOR27 | 0.94 | NOLOHH_16665 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | NOLOHH_18060 | rsxD | electron transport complex subunit RsxD | 0.62 | 36 |
| Escherichia coli ECRC101 | 0.94 | MCAODC_19185 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | MCAODC_17870 | rsxD | electron transport complex subunit RsxD | low | > 87 |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_26220 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | OKFHMN_27540 | rsxD | electron transport complex subunit RsxD | low | > 80 |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_00795 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | JDDGAC_02130 | rsxD | electron transport complex subunit RsxD | low | > 86 |
| Escherichia coli Nissle 1917 | 0.94 | ECOLIN_RS10700 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.90 | ECOLIN_RS09095 | | electron transport complex subunit RsxD | — | — |
| Escherichia fergusonii Becca | 0.94 | EFB2_02071 | | tRNA U34 carboxymethyltransferase | 0.89 | EFB2_02362 | | Ion-translocating oxidoreductase complex subunit D | 0.44 | 58 |
| Escherichia coli BW25113 | 0.94 | b1871 | yecP | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | 0.90 | b1630 | rsxD | electron transport complex protein RnfD (NCBI) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.92 | MPMX20_02776 | | tRNA U34 carboxymethyltransferase | 0.82 | MPMX20_02008 | | Ion-translocating oxidoreductase complex subunit D | low | > 85 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_0686 | | tRNA (mo5U34)-methyltransferase | 0.82 | EX28DRAFT_1626 | | electron transport complex, RnfABCDGE type, D subunit | low | > 76 |
| Klebsiella michiganensis M5al | 0.88 | BWI76_RS18195 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.86 | BWI76_RS16370 | | electron transport complex subunit D | low | > 92 |
| Serratia liquefaciens MT49 | 0.82 | IAI46_14675 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.68 | IAI46_11470 | | electron transport complex subunit RsxD | low | > 86 |
| Dickeya dianthicola ME23 | 0.81 | DZA65_RS10475 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.67 | DZA65_RS11040 | | electron transport complex subunit RsxD | low | > 75 |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS10065 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.66 | HGI48_RS10560 | | electron transport complex subunit RsxD | — | — |
| Dickeya dadantii 3937 | 0.80 | DDA3937_RS10035 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.67 | DDA3937_RS10560 | | electron transport complex subunit RsxD | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.80 | LU632_RS13460 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.74 | LU632_RS11320 | rsxD | electron transport complex subunit RsxD | — | — |
| Rahnella sp. WP5 | 0.78 | EX31_RS17290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.67 | EX31_RS06605 | | electron transport complex subunit RsxD | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS11890 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.71 | HER17_RS10845 | | electron transport complex subunit RsxD | low | > 75 |
| Pantoea sp. MT58 | 0.74 | IAI47_08405 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.76 | IAI47_10460 | | electron transport complex subunit RsxD | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_05895 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.59 | CSW01_05160 | | electron transport complex subunit D | — | — |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_1950 | | putative methyltransferase (RefSeq) | 0.58 | Shewana3_2171 | | electron transport complex, RnfABCDGE type, D subunit (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.64 | Shew_2082 | | putative methyltransferase (RefSeq) | 0.52 | Shew_2069 | | electron transport complex, RnfABCDGE type, D subunit (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.64 | SO2436 | | methyltransferase, putative (NCBI ptt file) | 0.58 | SO2511 | | membrane protein, putative (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.62 | Sama_1846 | | methyltransferase, putative (RefSeq) | 0.54 | Sama_1833 | | hypothetical protein (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_02226 | | tRNA (mo5U34)-methyltransferase | 0.52 | MIT1002_01254 | | Nitrogen fixation protein RnfD | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_06450 | | tRNA (mo5U34)-methyltransferase | 0.31 | AO356_18360 | | electron transporter RnfD | low | > 104 |
| Pseudomonas sp. RS175 | 0.54 | PFR28_00318 | | tRNA U34 carboxymethyltransferase | 0.34 | PFR28_03346 | | Ion-translocating oxidoreductase complex subunit D | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_3158 | | tRNA (5-methoxyuridine) 34 synthase | 0.30 | Pf6N2E2_5597 | | Electron transport complex protein RnfD | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.54 | AO353_16015 | | tRNA (mo5U34)-methyltransferase | 0.36 | AO353_04070 | | electron transporter RnfD | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_826 | | tRNA (5-methoxyuridine) 34 synthase | 0.34 | Pf1N1B4_736 | | Electron transport complex protein RnfD | low | > 87 |
| Pseudomonas putida KT2440 | 0.53 | PP_1440 | | tRNA (mo5U34)-methyltransferase | 0.26 | PP_1095 | | putative electron transport complex protein | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.53 | PfGW456L13_4812 | | tRNA (5-methoxyuridine) 34 synthase | 0.33 | PfGW456L13_1756 | | Electron transport complex protein RnfD | low | > 87 |
| Marinobacter adhaerens HP15 | 0.51 | HP15_2493 | | methyltransferase | 0.41 | HP15_1288 | | electron transport complex, RnfABCDGE type, D subunit | low | > 73 |
| Pseudomonas sp. S08-1 | 0.51 | OH686_05375 | | tRNA (mo5U34)-methyltransferase | 0.31 | OH686_03895 | | Electron transport complex protein RnfD | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.51 | Psest_3085 | | methyltransferase, putative | 0.45 | Psest_3115 | | electron transport complex, RnfABCDGE type, D subunit | low | > 67 |
| Kangiella aquimarina DSM 16071 | 0.50 | B158DRAFT_1515 | | methyltransferase, putative | 0.48 | B158DRAFT_2368 | | electron transport complex, RnfABCDGE type, D subunit | — | — |
Not shown: 5 genomes with orthologs for GFF1652 only; 10 genomes with orthologs for GFF3644 only