Conservation of cofitness between PS417_00900 and PS417_17545 in Pseudomonas simiae WCS417

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00900 4-aminobutyrate aminotransferase 1.0 PS417_17545 2-oxoisovalerate dehydrogenase 0.20 17
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.93 PFLU_RS19355 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.93 PFLU_RS19355 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha low > 109
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.97 Pf1N1B4_4480 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) low > 87
Pseudomonas sp. RS175 0.95 PFR28_04756 5-aminovalerate aminotransferase DavT 0.95 PFR28_02445 2-oxoisovalerate dehydrogenase subunit alpha low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.92 PfGW456L13_3540 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) low > 87
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_10715 4-aminobutyrate aminotransferase 0.95 AO356_22990 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.93 AO353_26635 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) 0.35 42
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.94 Pf6N2E2_481 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) low > 103
Pseudomonas putida KT2440 0.87 PP_0214 4-aminobutyrate aminotransferase 0.88 PP_4401 branched-chain alpha-keto acid dehydrogenase complex, alpha subunit low > 96
Shewanella amazonensis SB2B 0.70 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.25 Sama_1709 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (RefSeq) low > 62
Variovorax sp. OAS795 0.68 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.76 ABID97_RS06670 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha low > 91
Shewanella sp. ANA-3 0.68 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.25 Shewana3_2131 dehydrogenase, E1 component (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.25 SO2339 alpha keto acid dehydrogenase complex, E1 component, alpha subunit (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS26240 4-aminobutyrate aminotransferase 0.18 RR42_RS33045 pyruvate dehydrogenase 0.40 9
Ralstonia solanacearum PSI07 0.55 RPSI07_RS23805 4-aminobutyrate--2-oxoglutarate transaminase 0.21 RPSI07_RS16520 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha low > 81
Sinorhizobium meliloti 1021 0.54 SM_b21186 4-aminobutyrate aminotransferase 0.60 SMc03201 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) low > 103
Ralstonia solanacearum GMI1000 0.54 RS_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.21 RS_RS09070 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha low > 80
Ralstonia solanacearum UW163 0.53 UW163_RS04035 4-aminobutyrate--2-oxoglutarate transaminase 0.21 UW163_RS14260 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS09545 4-aminobutyrate--2-oxoglutarate transaminase 0.21 RALBFv3_RS00950 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha low > 76
Castellaniella sp019104865 MT123 0.52 ABCV34_RS01765 4-aminobutyrate--2-oxoglutarate transaminase 0.71 ABCV34_RS04975 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha low > 48
Shewanella loihica PV-4 0.52 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.26 Shew_1925 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (RefSeq) low > 60
Marinobacter adhaerens HP15 0.50 HP15_3708 4-aminobutyrate aminotransferase 0.59 HP15_61 chain A, alpha-keto acid dehydrogenase-like protein low > 73
Mycobacterium tuberculosis H37Rv 0.34 Rv2589 4-aminobutyrate aminotransferase GabT (gamma-amino-N-butyrate transaminase) (GABA transaminase) (glutamate:succinic semialdehyde transaminase) (GABA aminotransferase) (GABA-at) 0.19 Rv2497c Probable branched-chain keto acid dehydrogenase E1 component, alpha subunit BkdA low > 58

Not shown: 44 genomes with orthologs for PS417_00900 only; 6 genomes with orthologs for PS417_17545 only