Conservation of cofitness between GFF3495 and GFF3417 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3495 Succinylarginine dihydrolase (EC 3.5.3.23) 1.0 GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.39 3
Escherichia coli BW25113 0.87 b1745 astB succinylarginine dihydrolase (NCBI) 0.96 b1132 hflD hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.87 ECD_01714 succinylarginine dihydrolase 0.96 ECD_01130 putative lysogenization regulator — —
Escherichia coli ECRC101 0.86 MCAODC_18490 astB N-succinylarginine dihydrolase 0.96 MCAODC_22345 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC98 0.86 JDDGAC_01495 astB N-succinylarginine dihydrolase 0.96 JDDGAC_06625 hflD high frequency lysogenization protein HflD low > 86
Escherichia coli ECRC102 0.86 NIAGMN_01145 astB N-succinylarginine dihydrolase 0.96 NIAGMN_24885 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC99 0.86 KEDOAH_01190 astB N-succinylarginine dihydrolase 0.96 KEDOAH_24825 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC100 0.86 OKFHMN_26920 astB N-succinylarginine dihydrolase 0.96 OKFHMN_00740 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECOR38 0.86 HEPCGN_05285 astB N-succinylarginine dihydrolase 0.96 HEPCGN_24215 hflD high frequency lysogenization protein HflD low > 87
Escherichia coli ECOR27 0.86 NOLOHH_17435 astB N-succinylarginine dihydrolase 0.96 NOLOHH_20905 hflD high frequency lysogenization protein HflD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_01987 N-succinylarginine dihydrolase 0.96 OHPLBJKB_02536 High frequency lysogenization protein HflD low > 73
Escherichia coli ECRC62 0.86 BNILDI_16220 astB N-succinylarginine dihydrolase 0.96 BNILDI_19070 hflD high frequency lysogenization protein HflD low > 75
Escherichia fergusonii Becca 0.85 EFB2_02248 N-succinylarginine dihydrolase 0.96 EFB2_02843 High frequency lysogenization protein HflD low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS09730 N-succinylarginine dihydrolase 0.96 ECOLIN_RS06620 high frequency lysogenization protein HflD — —
Enterobacter sp. TBS_079 0.75 MPMX20_01868 N-succinylarginine dihydrolase 0.93 MPMX20_01816 High frequency lysogenization protein HflD low > 85
Enterobacter asburiae PDN3 0.75 EX28DRAFT_1749 succinylarginine dihydrolase (EC 3.5.3.23) 0.93 EX28DRAFT_1798 Uncharacterized protein involved in purine metabolism — —
Klebsiella michiganensis M5al 0.73 BWI76_RS11685 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.90 BWI76_RS11310 lysogenization protein HflD — —
Pantoea sp. MT58 0.71 IAI47_11080 N-succinylarginine dihydrolase 0.74 IAI47_11920 high frequency lysogenization protein HflD low > 76
Serratia liquefaciens MT49 0.67 IAI46_15320 N-succinylarginine dihydrolase 0.73 IAI46_10435 high frequency lysogenization protein HflD low > 86
Rahnella sp. WP5 0.60 EX31_RS17395 N-succinylarginine dihydrolase 0.73 EX31_RS24570 high frequency lysogenization protein HflD low > 89
Acinetobacter radioresistens SK82 0.58 MPMX26_02248 N-succinylarginine dihydrolase 0.15 MPMX26_01047 High frequency lysogenization protein HflD low > 36
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_3561 succinylarginine dihydrolase 0.31 Psyr_3191 Protein of unknown function DUF489 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_3561 succinylarginine dihydrolase 0.31 Psyr_3191 Protein of unknown function DUF489 low > 86
Pseudomonas putida KT2440 0.56 PP_4477 N-succinylarginine dihydrolase 0.32 PP_4015 HflD-like high frequency lysogenization protein low > 96
Pseudomonas sp. S08-1 0.55 OH686_21310 succinylarginine dihydrolase 0.34 OH686_00205 High frequency lysogenization protein HflD low > 80
Shewanella amazonensis SB2B 0.55 Sama_1321 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.38 Sama_2063 hypothetical protein (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_03005 succinylarginine dihydrolase 0.30 AO353_27710 DNA repair protein low > 101
Pseudomonas simiae WCS417 0.54 PS417_21690 N-succinylarginine dihydrolase 0.29 PS417_16545 DNA repair protein — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_1975 Succinylarginine dihydrolase (EC 3.5.3.23) 0.30 PfGW456L13_2638 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 87
Pseudomonas sp. RS175 0.53 PFR28_03279 N-succinylarginine dihydrolase 0.31 PFR28_02620 High frequency lysogenization protein HflD low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_18745 succinylarginine dihydrolase 0.30 AO356_22105 DNA repair protein — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS23295 N-succinylarginine dihydrolase 0.29 PFLU_RS18585 high frequency lysogenization protein HflD low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS23295 N-succinylarginine dihydrolase 0.29 PFLU_RS18585 high frequency lysogenization protein HflD low > 109
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5669 Succinylarginine dihydrolase (EC 3.5.3.23) 0.30 Pf6N2E2_285 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 103
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3445 Succinylarginine dihydrolase (EC 3.5.3.23) 0.30 Pf1N1B4_4047 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 87
Alteromonas macleodii MIT1002 0.53 MIT1002_01704 N-succinylarginine dihydrolase 0.41 MIT1002_01827 High frequency lysogenization protein HflD low > 70
Shewanella sp. ANA-3 0.53 Shewana3_1728 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.37 Shewana3_1746 hypothetical protein (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_2218 succinylarginine dihydrolase (EC 3.5.3.23) 0.27 B158DRAFT_1840 Uncharacterized protein involved in purine metabolism low > 40
Shewanella oneidensis MR-1 0.52 SO2706 astB Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.36 SO2634 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.52 Shew_2225 succinylarginine dihydrolase (RefSeq) 0.37 Shew_1559 hypothetical protein (RefSeq) low > 60
Marinobacter adhaerens HP15 0.52 HP15_3038 N-succinylarginine dihydrolase 0.40 HP15_2087 protein belonging to uncharacterized protein family UPF0274 low > 73

Not shown: 8 genomes with orthologs for GFF3495 only; 13 genomes with orthologs for GFF3417 only