Conservation of cofitness between GFF5159 and GFF3357 in Hydrogenophaga sp. GW460-11-11-14-LB1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF5159 Type IV pilus biogenesis protein PilE 1.0 GFF3357 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.72 9
Rhodanobacter denitrificans MT42 0.36 LRK55_RS01940 type IV pilin protein 0.40 LRK55_RS01480 tRNA pseudouridine(38-40) synthase TruA low > 63
Ralstonia solanacearum GMI1000 0.35 RS_RS13420 type IV pilin protein 0.49 RS_RS09975 tRNA pseudouridine(38-40) synthase TruA low > 80
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09240 Pilus assembly protein PilE 0.39 OKGIIK_04830 truA tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS05560 type IV pilin protein 0.50 RALBFv3_RS02595 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia solanacearum UW163 0.34 UW163_RS08065 type IV pilin protein 0.50 UW163_RS11130 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS01210 type IV pilin protein 0.48 ABZR87_RS14510 tRNA pseudouridine(38-40) synthase TruA low > 80
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS02190 type IV pilin protein 0.40 LRK54_RS01700 tRNA pseudouridine(38-40) synthase TruA low > 59
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS16860 pilus assembly protein PilE 0.45 RR42_RS14370 tRNA pseudouridine synthase A — —
Pseudomonas stutzeri RCH2 0.31 Psest_3375 prepilin-type N-terminal cleavage/methylation domain 0.41 Psest_2585 pseudouridylate synthase I low > 67
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.2029.1 Type IV pilus biogenesis protein PilE 0.37 Xcc-8004.1961.1 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 74
Pseudomonas sp. S08-1 0.28 OH686_16380 Type IV pilus biogenesis protein PilE 0.44 OH686_04450 tRNA pseudouridine(38-40) synthase low > 80
Shewanella sp. ANA-3 0.27 Shewana3_3128 methylation site containing protein (RefSeq) 0.44 Shewana3_1479 truA tRNA pseudouridine synthase A (RefSeq) low > 73
Shewanella loihica PV-4 0.26 Shew_1107 methylation site containing protein (RefSeq) 0.42 Shew_2306 tRNA pseudouridine synthase A (RefSeq) — —
Lysobacter sp. OAE881 0.26 ABIE51_RS15325 type IV pilin protein 0.40 ABIE51_RS08245 tRNA pseudouridine(38-40) synthase TruA low > 62
Ralstonia solanacearum PSI07 0.26 RPSI07_RS05905 type IV pilin protein 0.49 RPSI07_RS14720 tRNA pseudouridine(38-40) synthase TruA low > 81
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS21445 type IV pilin protein 0.40 ABZR86_RS08015 tRNA pseudouridine(38-40) synthase TruA low > 74
Variovorax sp. SCN45 0.24 GFF5419 Type IV pilus biogenesis protein PilE 0.62 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) low > 127
Variovorax sp. OAS795 0.23 ABID97_RS16105 type IV pilin protein 0.61 ABID97_RS08440 tRNA pseudouridine(38-40) synthase TruA low > 91
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS03755 pilus assembly protein PilE 0.54 BPHYT_RS33885 tRNA pseudouridine synthase A low > 109
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2417 prepilin-type N-terminal cleavage/methylation domain 0.41 B158DRAFT_1483 pseudouridylate synthase I low > 40
Shewanella amazonensis SB2B 0.19 Sama_0932 type IV pilus biogenesis protein PilE (RefSeq) 0.44 Sama_2150 truA tRNA pseudouridine synthase A (RefSeq) low > 62
Dechlorosoma suillum PS 0.19 Dsui_3487 Tfp pilus assembly protein PilE 0.56 Dsui_3194 pseudouridylate synthase I low > 51
Marinobacter adhaerens HP15 0.18 HP15_521 fimbrial protein pilin 0.45 HP15_1829 tRNA pseudouridine synthase A low > 73

Not shown: 0 genomes with orthologs for GFF5159 only; 76 genomes with orthologs for GFF3357 only