Conservation of cofitness between Psest_2104 and Psest_3115 in Pseudomonas stutzeri RCH2

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2104 IscR-regulated protein YhgI 1.0 Psest_3115 electron transport complex, RnfABCDGE type, D subunit 0.39 9
Pseudomonas sp. S08-1 0.86 OH686_03315 [4Fe-4S] cluster carrier protein NfuA 0.44 OH686_03895 Electron transport complex protein RnfD
Pseudomonas putida KT2440 0.85 PP_2378 Fe/S biogenesis protein NfuA 0.37 PP_1095 putative electron transport complex protein low > 96
Pseudomonas sp. RS175 0.83 PFR28_01371 Fe/S biogenesis protein NfuA 0.54 PFR28_03346 Ion-translocating oxidoreductase complex subunit D
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_2066 NfuA Fe-S protein maturation 0.48 Pf6N2E2_5597 Electron transport complex protein RnfD
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_00535 Fe/S biogenesis protein NfuA 0.51 AO356_18360 electron transporter RnfD
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_2849 NfuA Fe-S protein maturation 0.57 PfGW456L13_1756 Electron transport complex protein RnfD
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_21625 Fe/S biogenesis protein NfuA 0.58 AO353_04070 electron transporter RnfD low > 101
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_5659 NfuA Fe-S protein maturation 0.55 Pf1N1B4_736 Electron transport complex protein RnfD low > 87
Marinobacter adhaerens HP15 0.65 HP15_1791 yhgI protein 0.45 HP15_1288 electron transport complex, RnfABCDGE type, D subunit
Erwinia tracheiphila SCR3 0.56 LU632_RS22985 nfuA Fe-S biogenesis protein NfuA 0.43 LU632_RS11320 rsxD electron transport complex subunit RsxD
Dickeya dianthicola ME23 0.56 DZA65_RS20875 Fe-S biogenesis protein NfuA 0.45 DZA65_RS11040 electron transport complex subunit RsxD low > 75
Enterobacter asburiae PDN3 0.56 EX28DRAFT_4128 IscR-regulated protein YhgI 0.43 EX28DRAFT_1626 electron transport complex, RnfABCDGE type, D subunit
Rahnella sp. WP5 0.56 EX31_RS04925 Fe-S biogenesis protein NfuA 0.46 EX31_RS06605 electron transport complex subunit RsxD low > 89
Dickeya dianthicola 67-19 0.56 HGI48_RS19785 Fe-S biogenesis protein NfuA 0.44 HGI48_RS10560 electron transport complex subunit RsxD
Dickeya dadantii 3937 0.56 DDA3937_RS19655 Fe-S biogenesis protein NfuA 0.46 DDA3937_RS10560 electron transport complex subunit RsxD
Klebsiella michiganensis M5al 0.56 BWI76_RS26620 Fe-S biogenesis protein NfuA 0.47 BWI76_RS16370 electron transport complex subunit D low > 92
Pectobacterium carotovorum WPP14 0.55 HER17_RS01545 Fe-S biogenesis protein NfuA 0.45 HER17_RS10845 electron transport complex subunit RsxD low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF603 NfuA Fe-S protein maturation 0.45 GFF3644 Electron transport complex protein RnfD low > 78
Enterobacter sp. TBS_079 0.55 MPMX20_04301 Fe/S biogenesis protein NfuA 0.43 MPMX20_02008 Ion-translocating oxidoreductase complex subunit D 0.27 47
Serratia liquefaciens MT49 0.55 IAI46_23835 Fe-S biogenesis protein NfuA 0.44 IAI46_11470 electron transport complex subunit RsxD low > 86
Escherichia coli BW25113 0.55 b3414 gntY predicted gluconate transport associated protein (NCBI) 0.45 b1630 rsxD electron transport complex protein RnfD (NCBI) low > 76
Pantoea sp. MT58 0.55 IAI47_01780 Fe-S biogenesis protein NfuA 0.44 IAI47_10460 electron transport complex subunit RsxD
Escherichia coli ECRC62 0.55 BNILDI_02740 NfuA family Fe-S biogenesis protein 0.45 BNILDI_16850 rsxD electron transport complex subunit RsxD
Escherichia coli ECOR27 0.55 NOLOHH_08775 NfuA family Fe-S biogenesis protein 0.45 NOLOHH_18060 rsxD electron transport complex subunit RsxD
Escherichia coli ECRC101 0.55 MCAODC_07520 NfuA family Fe-S biogenesis protein 0.45 MCAODC_17870 rsxD electron transport complex subunit RsxD
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00289 Fe/S biogenesis protein NfuA 0.45 OHPLBJKB_02096 Electron transport complex subunit RsxD low > 73
Escherichia coli ECRC102 0.55 NIAGMN_14760 NfuA family Fe-S biogenesis protein 0.45 NIAGMN_00525 rsxD electron transport complex subunit RsxD
Escherichia coli ECOR38 0.55 HEPCGN_15800 NfuA family Fe-S biogenesis protein 0.45 HEPCGN_05925 rsxD electron transport complex subunit RsxD low > 85
Escherichia coli Nissle 1917 0.55 ECOLIN_RS19500 Fe-S biogenesis protein NfuA 0.46 ECOLIN_RS09095 electron transport complex subunit RsxD
Escherichia coli BL21 0.55 ECD_03266 Fe/S biogenesis protein, putative scaffold/chaperone protein 0.45 ECD_01600 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex
Escherichia coli ECRC101 0.55 OKFHMN_16990 NfuA family Fe-S biogenesis protein 0.45 OKFHMN_27540 rsxD electron transport complex subunit RsxD
Escherichia coli ECRC99 0.55 KEDOAH_11150 NfuA family Fe-S biogenesis protein 0.45 KEDOAH_00565 rsxD electron transport complex subunit RsxD
Escherichia fergusonii Becca 0.55 EFB2_00414 Fe/S biogenesis protein NfuA 0.46 EFB2_02362 Ion-translocating oxidoreductase complex subunit D low > 86
Escherichia coli ECRC98 0.55 JDDGAC_20620 NfuA family Fe-S biogenesis protein 0.45 JDDGAC_02130 rsxD electron transport complex subunit RsxD
Shewanella oneidensis MR-1 0.53 SO4619 yhgI yhgI protein (NCBI ptt file) 0.44 SO2511 membrane protein, putative (NCBI ptt file)
Alteromonas macleodii MIT1002 0.53 MIT1002_04019 Fe/S biogenesis protein NfuA 0.38 MIT1002_01254 Nitrogen fixation protein RnfD
Shewanella loihica PV-4 0.53 Shew_0106 putative DNA uptake protein (RefSeq) 0.41 Shew_2069 electron transport complex, RnfABCDGE type, D subunit (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_13725 Fe-S biogenesis protein NfuA 0.43 CSW01_05160 electron transport complex subunit D
Shewanella sp. ANA-3 0.52 Shewana3_4003 putative DNA uptake protein (RefSeq) 0.44 Shewana3_2171 electron transport complex, RnfABCDGE type, D subunit (RefSeq)
Shewanella amazonensis SB2B 0.50 Sama_3502 putative DNA uptake protein (RefSeq) 0.43 Sama_1833 hypothetical protein (RefSeq)
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0853 IscR-regulated protein YhgI 0.43 B158DRAFT_2368 electron transport complex, RnfABCDGE type, D subunit

Not shown: 12 genomes with orthologs for Psest_2104 only; 10 genomes with orthologs for Psest_3115 only