Conservation of cofitness between Psest_3937 and Psest_3045 in Pseudomonas stutzeri RCH2

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3937 ATP-dependent protease HslVU, ATPase subunit 1.0 Psest_3045 Cold shock proteins 0.25 9
Pseudomonas putida KT2440 0.88 PP_5001 protease HslVU, ATPase component 0.91 PP_1099 Cold shock protein CapB low > 96
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0394 Heat shock protein HslU 0.98 Psyr_3884 cold-shock DNA-binding protein family — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0394 Heat shock protein HslU 0.98 Psyr_3884 cold-shock DNA-binding protein family — —
Pseudomonas sp. RS175 0.87 PFR28_04998 ATP-dependent protease ATPase subunit HslU 0.96 PFR28_00498 Cold shock protein CapB low > 88
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1553 ATP-dependent hsl protease ATP-binding subunit HslU 0.98 Pf1N1B4_3171 Cold shock protein CspA — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_12425 ATP-dependent protease ATP-binding subunit HslU 0.98 AO353_16935 cold-shock protein — —
Pseudomonas simiae WCS417 0.86 PS417_01915 ATP-dependent protease ATP-binding subunit HslU 0.98 PS417_06370 cold-shock protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU 0.98 PFLU_RS06435 cold-shock protein — —
Pseudomonas fluorescens SBW25 0.86 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU 0.98 PFLU_RS06435 cold-shock protein — —
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_3770 ATP-dependent hsl protease ATP-binding subunit HslU 0.98 Pf6N2E2_2967 Cold shock protein CspA low > 103
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_09460 ATP-dependent protease ATP-binding subunit HslU 0.98 AO356_05540 cold-shock protein low > 104
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_290 ATP-dependent hsl protease ATP-binding subunit HslU 0.98 PfGW456L13_4642 Cold shock protein CspA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2313 ATP-dependent hsl protease ATP-binding subunit HslU 0.60 GFF454 Cold shock protein CspA low > 78
Enterobacter sp. TBS_079 0.73 MPMX20_04538 ATP-dependent protease ATPase subunit HslU 0.61 MPMX20_02529 Cold shock protein CspA low > 85
Escherichia fergusonii Becca 0.73 EFB2_04687 ATP-dependent protease ATPase subunit HslU 0.60 EFB2_00251 Cold shock protein CspA low > 86
Escherichia coli ECOR38 0.73 HEPCGN_12385 hslU HslU--HslV peptidase ATPase subunit 0.60 HEPCGN_14895 cspA Major cold shock protein low > 85
Escherichia coli Nissle 1917 0.73 ECOLIN_RS22635 HslU--HslV peptidase ATPase subunit 0.60 ECOLIN_RS20345 RNA chaperone/antiterminator CspA low > 52
Escherichia coli ECRC102 0.73 NIAGMN_11495 hslU HslU--HslV peptidase ATPase subunit 0.60 NIAGMN_13765 cspA Major cold shock protein — —
Escherichia coli BW25113 0.73 b3931 hslU ATP-dependent protease ATP-binding subunit (NCBI) 0.60 b3556 cspA major cold shock protein (NCBI) — —
Escherichia coli ECRC101 0.73 MCAODC_04240 hslU HslU--HslV peptidase ATPase subunit 0.60 MCAODC_06520 cspA Major cold shock protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_04120 ATP-dependent protease ATPase subunit HslU 0.60 OHPLBJKB_00150 Cold shock protein CspA low > 73
Escherichia coli ECRC98 0.73 JDDGAC_17365 hslU HslU--HslV peptidase ATPase subunit 0.60 JDDGAC_19635 cspA Major cold shock protein — —
Escherichia coli ECRC101 0.73 OKFHMN_13740 hslU HslU--HslV peptidase ATPase subunit 0.60 OKFHMN_16005 cspA Major cold shock protein — —
Escherichia coli ECOR27 0.73 NOLOHH_05885 hslU HslU--HslV peptidase ATPase subunit 0.60 NOLOHH_07950 cspA Major cold shock protein — —
Escherichia coli BL21 0.73 ECD_03816 molecular chaperone and ATPase component of HslUV protease 0.60 ECD_03406 RNA chaperone and antiterminator, cold-inducible — —
Escherichia coli ECRC99 0.73 KEDOAH_14420 hslU HslU--HslV peptidase ATPase subunit 0.60 KEDOAH_12145 cspA Major cold shock protein — —
Escherichia coli ECRC62 0.73 BNILDI_05645 hslU HslU--HslV peptidase ATPase subunit 0.60 BNILDI_03595 cspA Major cold shock protein — —
Shewanella loihica PV-4 0.73 Shew_0374 hslU ATP-dependent protease ATP-binding subunit (RefSeq) 0.65 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) — —
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4404 ATP-dependent protease HslVU, ATPase subunit 0.60 EX28DRAFT_2409 Cold shock proteins — —
Erwinia tracheiphila SCR3 0.72 LU632_RS19675 hslU HslU--HslV peptidase ATPase subunit 0.61 LU632_RS19015 cspA RNA chaperone/antiterminator CspA low > 74
Dickeya dadantii 3937 0.72 DDA3937_RS00915 HslU--HslV peptidase ATPase subunit 0.63 DDA3937_RS19755 cold-shock protein low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS21505 HslU--HslV peptidase ATPase subunit 0.63 DZA65_RS20940 cold-shock protein low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS20460 HslU--HslV peptidase ATPase subunit 0.63 HGI48_RS19865 cold-shock protein — —
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS01065 ATP-dependent protease ATP-binding subunit HslU 0.62 RR42_RS03630 cold-shock protein low > 128
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS05120 ATP-dependent protease ATPase subunit HslU 0.63 ABZR87_RS11980 cold-shock protein low > 80
Ralstonia solanacearum PSI07 0.68 RPSI07_RS23740 ATP-dependent protease ATPase subunit HslU 0.64 RPSI07_RS06545 cold-shock protein low > 81
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS00915 ATP-dependent protease 0.63 HSERO_RS15195 cold-shock protein — —
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS15040 ATP-dependent protease ATPase subunit HslU 0.73 ABZR86_RS14240 cold-shock protein — —
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS08520 ATP-dependent protease ATPase subunit HslU 0.86 LRK54_RS08620 cold-shock protein — —
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_15315 hslU ATP-dependent protease ATPase subunit HslU 0.86 OKGIIK_15385 cspC cold-shock protein — —
Azospirillum brasilense Sp245 0.57 AZOBR_RS01650 ATP-dependent protease 0.49 AZOBR_RS01055 cold-shock protein — —

Not shown: 46 genomes with orthologs for Psest_3937 only; 4 genomes with orthologs for Psest_3045 only