Conservation of cofitness between Psest_3440 and Psest_3035 in Pseudomonas stutzeri RCH2

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3440 16S RNA G1207 methylase RsmC 1.0 Psest_3035 Protein of unknown function (DUF1282). 0.30 19
Pseudomonas sp. S08-1 0.80 OH686_16135 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.76 OH686_05155 Inner membrane protein YohC low > 80
Pseudomonas putida KT2440 0.75 PP_4648 Ribosomal RNA large subunit methyltransferase G 0.75 PP_1640 putative inner membrane protein of unknown function low > 96
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.73 PfGW456L13_2019 probable membrane protein YPO2362 low > 87
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.73 Pf1N1B4_3490 probable membrane protein YPO2362 low > 87
Pseudomonas sp. RS175 0.73 PFR28_03798 Ribosomal RNA large subunit methyltransferase G 0.74 PFR28_03237 Inner membrane protein YohC low > 88
Pseudomonas fluorescens SBW25 0.73 PFLU_RS26260 class I SAM-dependent methyltransferase 0.70 PFLU_RS18460 YIP1 family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_15650 50S rRNA methyltransferase 0.74 AO356_18995 hypothetical protein low > 104
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS26260 class I SAM-dependent methyltransferase 0.70 PFLU_RS18460 YIP1 family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_13950 50S rRNA methyltransferase 0.72 AO353_02785 hypothetical protein low > 101
Pseudomonas simiae WCS417 0.72 PS417_24335 50S rRNA methyltransferase 0.71 PS417_16420 membrane protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.73 Pf6N2E2_5710 probable membrane protein YPO2362 low > 103
Escherichia coli ECRC100 0.39 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 OKFHMN_23640 yohC Inner membrane protein YohC low > 80
Escherichia coli ECRC99 0.39 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 KEDOAH_04545 yohC Inner membrane protein YohC — —
Escherichia coli ECRC101 0.39 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 MCAODC_14690 yohC Inner membrane protein YohC low > 87
Escherichia coli Nissle 1917 0.39 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 ECOLIN_RS12505 Yip1 family protein — —
Escherichia fergusonii Becca 0.39 EFB2_00728 Ribosomal RNA large subunit methyltransferase G 0.51 EFB2_01720 Inner membrane protein YohC low > 86
Escherichia coli ECRC98 0.39 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 JDDGAC_27595 yohC Inner membrane protein YohC low > 86
Escherichia coli ECRC102 0.39 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 NIAGMN_21405 yohC Inner membrane protein YohC — —
Escherichia coli ECOR27 0.39 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 NOLOHH_15180 yohC Inner membrane protein YohC low > 75
Escherichia coli ECRC62 0.39 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 BNILDI_14130 yohC Inner membrane protein YohC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G 0.51 OHPLBJKB_01575 Inner membrane protein YohC low > 73
Escherichia coli BL21 0.38 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent 0.51 ECD_02065 Yip1 family inner membrane protein low > 61
Escherichia coli ECOR38 0.38 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 HEPCGN_02215 yohC Inner membrane protein YohC low > 87
Escherichia coli BW25113 0.38 b3084 ygjO putative enzyme (VIMSS) 0.51 b2135 yohC orf, hypothetical protein (VIMSS) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.55 GFF3810 Putative membrane protein low > 78
Serratia liquefaciens MT49 0.38 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.49 IAI46_06895 YIP1 family protein low > 86
Enterobacter asburiae PDN3 0.38 EX28DRAFT_3153 16S RNA G1207 methylase RsmC 0.53 EX28DRAFT_0425 Protein of unknown function (DUF1282) low > 76
Klebsiella michiganensis M5al 0.38 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.50 BWI76_RS19530 YIP1 family protein low > 92
Enterobacter sp. TBS_079 0.37 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G 0.53 MPMX20_03104 Inner membrane protein YohC low > 85
Pantoea sp. MT58 0.37 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.53 IAI47_13400 YIP1 family protein low > 76
Shewanella amazonensis SB2B 0.37 Sama_2548 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.47 Sama_1217 hypothetical protein (RefSeq) low > 62
Rahnella sp. WP5 0.36 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.51 EX31_RS23820 YIP1 family protein low > 89
Alteromonas macleodii MIT1002 0.32 MIT1002_00689 Ribosomal RNA large subunit methyltransferase G 0.46 MIT1002_02521 Inner membrane protein YohC low > 70
Shewanella loihica PV-4 0.31 Shew_2886 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.51 Shew_2515 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_0932 methyltransferase small (RefSeq) 0.50 Shewana3_2668 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.31 SO1097 conserved hypothetical protein (NCBI ptt file) 0.49 SO1787 conserved hypothetical protein (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.27 HP15_2265 rRNA (guanine-N2-)-methyltransferase, RsmD 0.56 HP15_754 membrane protein containing DUF1282 low > 73

Not shown: 8 genomes with orthologs for Psest_3440 only; 1 genomes with orthologs for Psest_3035 only