Conservation of cofitness between PS417_02485 and PS417_14960 in Pseudomonas simiae WCS417

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 1.0 PS417_14960 ATPase 0.33 16
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.95 PFLU_RS16990 HAMP domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.95 PFLU_RS16990 HAMP domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_13140 tRNA dimethylallyltransferase 0.79 AO353_22965 ATPase low > 101
Escherichia coli BL21 0.59 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 0.23 ECD_01578 sensory histidine kinase of RstAB two-component system — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03871 tRNA dimethylallyltransferase 0.23 OHPLBJKB_02117 Sensor protein RstB — —
Escherichia coli BW25113 0.59 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) 0.24 b1609 rstB sensory histidine kinase in two-component regulatory system with RstA (NCBI) low > 76
Escherichia coli ECOR27 0.59 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 NOLOHH_18165 rstB two-component system sensor histidine kinase RstB — —
Klebsiella michiganensis M5al 0.59 BWI76_RS02530 tRNA dimethylallyltransferase 0.26 BWI76_RS16260 two-component sensor histidine kinase low > 92
Escherichia coli ECOR38 0.59 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 HEPCGN_06035 rstB two-component system sensor histidine kinase RstB low > 85
Escherichia coli Nissle 1917 0.59 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 ECOLIN_RS08985 two-component system sensor histidine kinase RstB low > 52
Escherichia coli ECRC102 0.59 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 NIAGMN_00415 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECRC101 0.59 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 OKFHMN_27660 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECRC99 0.59 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 KEDOAH_00445 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECRC101 0.59 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 MCAODC_17750 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECRC98 0.59 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 JDDGAC_02250 rstB two-component system sensor histidine kinase RstB — —
Escherichia fergusonii Becca 0.59 EFB2_04364 tRNA dimethylallyltransferase 0.24 EFB2_02383 Sensor protein RstB low > 86
Escherichia coli ECRC62 0.59 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.24 BNILDI_16955 rstB two-component system sensor histidine kinase RstB — —
Enterobacter asburiae PDN3 0.59 EX28DRAFT_3368 tRNA dimethylallyltransferase 0.26 EX28DRAFT_1606 Signal transduction histidine kinase low > 76
Enterobacter sp. TBS_079 0.58 MPMX20_00452 tRNA dimethylallyltransferase 0.25 MPMX20_02024 Sensor protein RstB low > 85
Dickeya dadantii 3937 0.58 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.23 DDA3937_RS12235 two-component system sensor histidine kinase RstB low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.23 DZA65_RS12765 two-component system sensor histidine kinase RstB low > 75
Rahnella sp. WP5 0.58 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.23 EX31_RS06515 two-component system sensor histidine kinase RstB low > 89
Dickeya dianthicola 67-19 0.58 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.23 HGI48_RS12325 two-component system sensor histidine kinase RstB low > 71
Shewanella oneidensis MR-1 0.58 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) 0.21 SO3595 sensor protein RstB, putative (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.58 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.23 HER17_RS09690 two-component system sensor histidine kinase RstB low > 75
Shewanella loihica PV-4 0.57 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.21 Shew_0895 integral membrane sensor signal transduction histidine kinase (RefSeq) low > 60
Serratia liquefaciens MT49 0.57 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.25 IAI46_13305 two-component system sensor histidine kinase RstB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.26 GFF1804 Sensory histidine kinase in two-component regulatory system with RstA low > 78
Pantoea sp. MT58 0.57 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.25 IAI47_09540 two-component system sensor histidine kinase RstB low > 76
Shewanella amazonensis SB2B 0.56 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.21 Sama_2801 sensor protein RstB, putative (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.21 Shewana3_3185 ATPase domain-containing protein (RefSeq) — —
Erwinia tracheiphila SCR3 0.54 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.25 LU632_RS11460 rstB two-component system sensor histidine kinase RstB low > 74
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.16 ABZR86_RS19125 ATP-binding protein — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS12065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.29 RPSI07_RS09800 two-component sensor histidine kinase low > 81
Ralstonia solanacearum GMI1000 0.51 RS_RS12855 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.28 RS_RS15390 two-component sensor histidine kinase 0.44 50
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS00875 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.22 ABZR87_RS03095 ATP-binding protein low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS17210 tRNA delta(2)-isopentenylpyrophosphate transferase 0.30 RR42_RS14265 histidine kinase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS05235 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.28 RALBFv3_RS07450 two-component sensor histidine kinase low > 76
Ralstonia solanacearum UW163 0.49 UW163_RS08390 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.28 UW163_RS06170 two-component sensor histidine kinase — —
Variovorax sp. OAS795 0.46 ABID97_RS20320 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.18 ABID97_RS03805 ATP-binding protein — —
Variovorax sp. SCN45 0.46 GFF4798 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.18 GFF5075 Two-component system sensor histidine kinase Dtpsy_0212 — —

Not shown: 60 genomes with orthologs for PS417_02485 only; 0 genomes with orthologs for PS417_14960 only