Conservation of cofitness between PGA1_c11960 and PGA1_c27070 in Phaeobacter inhibens DSM 17395

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c11960 uracil phosphoribosyltransferase Upp 1.0 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) 0.27 13
Dinoroseobacter shibae DFL-12 0.83 Dshi_0831 uracil phosphoribosyltransferase (RefSeq) 0.77 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) low > 64
Agrobacterium fabrum C58 0.73 Atu0135 uracil phosphoribosyltransferase 0.50 Atu4160 RNA polymerase sigma factor low > 89
Rhizobium sp. OAE497 0.72 ABIE40_RS00825 uracil phosphoribosyltransferase 0.48 ABIE40_RS14450 RNA polymerase sigma factor low > 107
Sinorhizobium meliloti 1021 0.71 SMc04121 uracil phosphoribosyltransferase 0.48 SMc01506 RNA polymerase sigma factor low > 103
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS30815 uracil phosphoribosyltransferase 0.26 RR42_RS32410 RNA polymerase subunit sigma-24
Bosea sp. OAE506 0.65 ABIE41_RS22700 uracil phosphoribosyltransferase 0.51 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor low > 77
Variovorax sp. OAS795 0.64 ABID97_RS16850 uracil phosphoribosyltransferase 0.25 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor
Variovorax sp. SCN45 0.64 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.26 GFF215 RNA polymerase sigma-54 factor RpoN low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.27 GFF4350 RNA polymerase sigma-54 factor RpoN low > 90
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS03500 uracil phosphoribosyltransferase 0.23 HSERO_RS13530 RNA polymerase subunit sigma-24
Ralstonia solanacearum UW163 0.59 UW163_RS10140 uracil phosphoribosyltransferase 0.22 UW163_RS06605 RNA polymerase sigma factor
Ralstonia solanacearum GMI1000 0.59 RS_RS10980 uracil phosphoribosyltransferase 0.23 RS_RS14950 RNA polymerase sigma factor
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS03530 uracil phosphoribosyltransferase 0.22 RALBFv3_RS07010 RNA polymerase sigma factor
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS24390 uracil phosphoribosyltransferase 0.31 QEN71_RS00095 RNA polymerase sigma factor low > 153
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS15395 uracil phosphoribosyltransferase 0.23 ABZR87_RS02660 RNA polymerase sigma factor low > 80
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13695 uracil phosphoribosyltransferase 0.23 RPSI07_RS10230 RNA polymerase sigma factor
Paraburkholderia graminis OAS925 0.58 ABIE53_001547 uracil phosphoribosyltransferase 0.29 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) low > 113
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS06415 uracil phosphoribosyltransferase 0.29 BPHYT_RS24740 RNA polymerase subunit sigma-24 low > 109
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04523 uracil phosphoribosyltransferase 0.30 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily low > 103
Pseudomonas putida KT2440 0.52 PP_0746 Uracil phosphoribosyltransferase 0.23 PP_2888 putative ECF sigma factor PrtI
Shewanella loihica PV-4 0.51 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.17 Shew_2433 RNA polymerase sigma factor (RefSeq)
Dechlorosoma suillum PS 0.50 Dsui_2333 uracil phosphoribosyltransferase 0.20 Dsui_1302 RNA polymerase sigma factor, sigma-70 family low > 51
Marinobacter adhaerens HP15 0.50 HP15_2306 uracil phosphoribosyltransferase 0.17 HP15_342 RNA polymerase sigma factor SigE low > 73
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS09615 uracil phosphoribosyltransferase 0.18 ABZR86_RS09010 sigma-70 family RNA polymerase sigma factor low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_14760 uracil phosphoribosyltransferase 0.25 CA264_10915 RNA polymerase subunit sigma low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_0597 Uracil phosphoribosyltransferase 0.25 Echvi_0287 RNA polymerase sigma factor, sigma-70 family low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS19460 uracil phosphoribosyltransferase 0.25 CA265_RS11995 RNA polymerase subunit sigma low > 88

Not shown: 71 genomes with orthologs for PGA1_c11960 only; 3 genomes with orthologs for PGA1_c27070 only