Conservation of cofitness between GFF1636 and GFF253 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1636 Zinc ABC transporter, periplasmic-binding protein ZnuA 1.0 GFF253 Transcriptional activator MetR 0.35 10
Escherichia coli ECRC98 0.84 JDDGAC_00880 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 JDDGAC_17955 metR HTH-type transcriptional regulator MetR low > 86
Escherichia coli ECRC101 0.84 MCAODC_19100 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 MCAODC_04835 metR HTH-type transcriptional regulator MetR 0.58 42
Escherichia coli ECRC99 0.84 KEDOAH_01800 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 KEDOAH_13820 metR HTH-type transcriptional regulator MetR
Escherichia coli ECRC102 0.84 NIAGMN_01755 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 NIAGMN_12085 metR HTH-type transcriptional regulator MetR
Escherichia coli ECRC100 0.84 OKFHMN_26305 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 OKFHMN_14330 metR HTH-type transcriptional regulator MetR 0.79 45
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0699 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.92 EX28DRAFT_4493 Transcriptional regulator low > 76
Escherichia fergusonii Becca 0.82 EFB2_02085 High-affinity zinc uptake system protein ZnuA 0.93 EFB2_04809 HTH-type transcriptional regulator MetR low > 86
Escherichia coli Nissle 1917 0.81 ECOLIN_RS10345 zinc ABC transporter substrate-binding protein ZnuA 0.93 ECOLIN_RS30005 HTH-type transcriptional regulator MetR
Escherichia coli ECRC62 0.81 BNILDI_15535 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 BNILDI_05070 metR HTH-type transcriptional regulator MetR 0.75 15
Escherichia coli ECOR27 0.81 NOLOHH_16745 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 NOLOHH_06460 metR HTH-type transcriptional regulator MetR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_01871 High-affinity zinc uptake system protein ZnuA 0.93 OHPLBJKB_04223 HTH-type transcriptional regulator MetR low > 73
Escherichia coli BW25113 0.81 b1857 yebL putative adhesin (VIMSS) 0.93 b3828 metR DNA-binding transcriptional activator, homocysteine-binding (NCBI) 0.50 6
Escherichia coli BL21 0.81 ECD_01828 zinc ABC transporter periplasmic binding protein 0.93 ECD_03707 methionine biosynthesis regulon transcriptional regulator low > 61
Escherichia coli ECOR38 0.80 HEPCGN_04710 znuA zinc ABC transporter substrate-binding protein ZnuA 0.93 HEPCGN_13030 metR HTH-type transcriptional regulator MetR low > 87
Klebsiella michiganensis M5al 0.78 BWI76_RS18130 zinc ABC transporter substrate-binding protein 0.87 BWI76_RS01275 LysR family transcriptional regulator low > 92
Erwinia tracheiphila SCR3 0.69 LU632_RS13395 znuA zinc ABC transporter substrate-binding protein ZnuA 0.78 LU632_RS24035 metR HTH-type transcriptional regulator MetR low > 74
Serratia liquefaciens MT49 0.68 IAI46_14605 zinc ABC transporter substrate-binding protein ZnuA 0.84 IAI46_01030 HTH-type transcriptional regulator MetR low > 86
Pantoea sp. MT58 0.66 IAI47_08465 zinc ABC transporter substrate-binding protein ZnuA 0.80 IAI47_18315 HTH-type transcriptional regulator MetR low > 76
Rahnella sp. WP5 0.63 EX31_RS10675 zinc ABC transporter substrate-binding protein ZnuA 0.86 EX31_RS25370 HTH-type transcriptional regulator MetR low > 89
Dickeya dadantii 3937 0.62 DDA3937_RS10100 zinc ABC transporter substrate-binding protein ZnuA 0.85 DDA3937_RS20385 HTH-type transcriptional regulator MetR low > 74
Pectobacterium carotovorum WPP14 0.61 HER17_RS11805 zinc ABC transporter substrate-binding protein ZnuA 0.82 HER17_RS20690 HTH-type transcriptional regulator MetR low > 75
Dickeya dianthicola 67-19 0.61 HGI48_RS10130 zinc ABC transporter substrate-binding protein ZnuA 0.84 HGI48_RS00815 HTH-type transcriptional regulator MetR low > 71
Dickeya dianthicola ME23 0.58 DZA65_RS10545 zinc ABC transporter substrate-binding protein ZnuA 0.84 DZA65_RS00870 HTH-type transcriptional regulator MetR low > 75
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_10400 zinc ABC transporter substrate-binding protein 0.55 CSW01_08580 HTH-type transcriptional regulator MetR low > 62
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_597 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.42 PfGW456L13_4778 Transcriptional activator MetR low > 87
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1872 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.42 Pf1N1B4_784 Transcriptional activator MetR low > 87
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_10915 ABC transporter substrate-binding protein 0.42 AO353_16210 XRE family transcriptional regulator low > 101
Pseudomonas fluorescens SBW25 0.32 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.42 PFLU_RS05540 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.42 PFLU_RS05540 LysR family transcriptional regulator low > 109
Pseudomonas sp. RS175 0.32 PFR28_04621 High-affinity zinc uptake system protein ZnuA 0.43 PFR28_03478 HTH-type transcriptional regulator MetR low > 88
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_4165 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.42 Pf6N2E2_5471 Transcriptional activator MetR low > 103
Pseudomonas simiae WCS417 0.31 PS417_00390 ABC transporter substrate-binding protein 0.42 PS417_05455 XRE family transcriptional regulator low > 88
Pseudomonas sp. S08-1 0.31 OH686_12235 Zinc ABC transporter, substrate-binding protein ZnuA 0.42 OH686_20465 Transcriptional activator MetR low > 80
Agrobacterium fabrum C58 0.31 Atu1521 ABC transporter, substrate binding protein (zinc) 0.30 Atu3827 LysR family transcriptional regulator low > 89
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_11480 ABC transporter substrate-binding protein 0.42 AO356_17735 XRE family transcriptional regulator low > 104
Pseudomonas putida KT2440 0.29 PP_0120 putative zinc ABC transporter 0.42 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding 0.39 4
Azospirillum sp. SherDot2 0.29 MPMX19_05515 High-affinity zinc uptake system protein ZnuA 0.27 MPMX19_00645 HTH-type transcriptional regulator MetR low > 112
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0275 Periplasmic solute binding protein 0.43 Psyr_3917 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0275 Periplasmic solute binding protein 0.43 Psyr_3917 transcriptional regulator, LysR family low > 86
Azospirillum brasilense Sp245 0.27 AZOBR_RS01585 zinc transporter 0.29 AZOBR_RS24270 LysR family transcriptional regulator low > 97
Pseudomonas stutzeri RCH2 0.26 Psest_4307 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.43 Psest_1450 Transcriptional regulator
Marinobacter adhaerens HP15 0.23 HP15_2237 ABC transporter metal-binding lipoprotein 0.32 HP15_458 transcriptional regulator, LysR family protein
Dinoroseobacter shibae DFL-12 0.19 Dshi_1704 periplasmic solute binding protein (RefSeq) 0.36 Dshi_2079 transcriptional regulator, LysR family (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.15 PGA1_262p02220 ABC transporter, periplasmic solute-binding protein 0.36 PGA1_c11710 transcriptional regulator, LysR family
Acinetobacter radioresistens SK82 0.12 MPMX26_00096 High-affinity zinc uptake system protein ZnuA 0.35 MPMX26_01201 HTH-type transcriptional regulator MetR low > 36

Not shown: 6 genomes with orthologs for GFF1636 only; 21 genomes with orthologs for GFF253 only