Conservation of cofitness between GFF3309 and GFF2035 in Hydrogenophaga sp. GW460-11-11-14-LB1

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3309 Uricase (urate oxidase) (EC 1.7.3.3) 1.0 GFF2035 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.77 19
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_05158 putative urate catabolism protein 0.35 H281DRAFT_05180 putrescine transport system substrate-binding protein low > 103
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS07020 allantoinase PuuE 0.33 QEN71_RS12945 polyamine ABC transporter substrate-binding protein low > 153
Castellaniella sp019104865 MT123 0.68 ABCV34_RS06095 allantoinase PuuE 0.36 ABCV34_RS02360 polyamine ABC transporter substrate-binding protein low > 48
Serratia liquefaciens MT49 0.66 IAI46_04175 allantoinase PuuE 0.33 IAI46_08370 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 86
Dickeya dadantii 3937 0.66 DDA3937_RS16690 allantoinase PuuE 0.36 DDA3937_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 74
Pectobacterium carotovorum WPP14 0.66 HER17_RS17765 allantoinase PuuE 0.36 HER17_RS12500 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS16775 allantoinase PuuE 0.35 HGI48_RS09480 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS17850 allantoinase PuuE 0.35 DZA65_RS09790 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 75
Pantoea sp. MT58 0.65 IAI47_15300 allantoinase PuuE 0.35 IAI47_13045 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 76
Rahnella sp. WP5 0.62 EX31_RS21150 allantoinase PuuE 0.34 EX31_RS09630 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 89
Enterobacter asburiae PDN3 0.59 EX28DRAFT_1944 putative urate catabolism protein 0.34 EX28DRAFT_2099 Spermidine/putrescine-binding periplasmic protein low > 76
Azospirillum sp. SherDot2 0.59 MPMX19_04444 hypothetical protein 0.24 MPMX19_04883 Spermidine-binding periplasmic protein SpuE low > 112
Pseudomonas putida KT2440 0.58 PP_4286 allantoinase 0.36 PP_5181 spermidine/putrescine ABC transporter - periplasmic subunit low > 96
Klebsiella michiganensis M5al 0.58 BWI76_RS10540 allantoinase 0.35 BWI76_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF low > 92
Enterobacter sp. TBS_079 0.58 MPMX20_01662 hypothetical protein 0.34 MPMX20_01495 Putrescine-binding periplasmic protein low > 85
Azospirillum brasilense Sp245 0.58 AZOBR_RS14190 chitin deacetylase 0.25 AZOBR_RS08845 ABC transporter substrate-binding protein low > 97
Pseudomonas stutzeri RCH2 0.58 Psest_1200 putative urate catabolism protein 0.34 Psest_4284 Spermidine/putrescine-binding periplasmic protein low > 67
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS21385 allantoinase PuuE 0.36 PFLU_RS28775 polyamine ABC transporter substrate-binding protein 0.20 104
Pseudomonas fluorescens SBW25 0.57 PFLU_RS21385 allantoinase PuuE 0.36 PFLU_RS28775 polyamine ABC transporter substrate-binding protein low > 109
Pseudomonas sp. RS175 0.57 PFR28_03143 hypothetical protein 0.36 PFR28_04295 Putrescine-binding periplasmic protein SpuD 0.28 51
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4180 Uricase (urate oxidase) (EC 1.7.3.3) 0.37 PfGW456L13_928 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 87
Pseudomonas simiae WCS417 0.57 PS417_19415 allantoinase 0.36 PS417_27125 spermidine/putrescine ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5805 Uricase (urate oxidase) (EC 1.7.3.3) 0.37 Pf6N2E2_4513 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_19460 allantoinase (EC 3.5.2.5) (from data) 0.36 AO356_13155 spermidine/putrescine ABC transporter substrate-binding protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1809 Polysaccharide deacetylase 0.37 Psyr_4865 extracellular solute-binding protein, family 1 low > 86
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3766 Uricase (urate oxidase) (EC 1.7.3.3) 0.37 Pf1N1B4_2259 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 87
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1809 Polysaccharide deacetylase 0.37 Psyr_4865 extracellular solute-binding protein, family 1 low > 86
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_02688 PuuE-related allantoinase 0.19 CCNA_03239 spermidine/putrescine-binding protein low > 67
Caulobacter crescentus NA1000 0.57 CCNA_02688 PuuE-related allantoinase 0.19 CCNA_03239 spermidine/putrescine-binding protein low > 66
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_02320 allantoinase 0.37 AO353_08580 spermidine/putrescine ABC transporter substrate-binding protein low > 101
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.362.1 Uricase (urate oxidase) (EC 1.7.3.3) 0.33 Xcc-8004.2206.1 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 74
Rhizobium sp. OAE497 0.51 ABIE40_RS13840 allantoinase PuuE 0.32 ABIE40_RS03265 polyamine ABC transporter substrate-binding protein low > 107
Agrobacterium fabrum C58 0.51 Atu2328 hypothetical protein 0.33 Atu0609 ABC transporter, substrate binding protein (putrescine) low > 89

Not shown: 12 genomes with orthologs for GFF3309 only; 26 genomes with orthologs for GFF2035 only