Conservation of cofitness between Psest_1648 and Psest_1789 in Pseudomonas stutzeri RCH2

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1648 ATP-dependent DNA ligase 1.0 Psest_1789 Zn-dependent hydrolases, including glyoxylases 0.22 19
Pseudomonas sp. RS175 0.75 PFR28_00508 DNA ligase 0.59 PFR28_02443 putative metallo-hydrolase low > 88
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase 0.63 Psyr_0078 Beta-lactamase-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_3873 ATP-dependent DNA ligase:ATP-dependent DNA ligase 0.63 Psyr_0078 Beta-lactamase-like protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_05490 ATP-dependent DNA ligase 0.57 AO356_23000 MBL fold metallo-hydrolase low > 104
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_2957 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.64 Pf6N2E2_1531 FIG146518: Zn-dependent hydrolases, including glyoxylases low > 103
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_3180 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.59 Pf1N1B4_4482 FIG146518: Zn-dependent hydrolases, including glyoxylases low > 87
Pseudomonas simiae WCS417 0.71 PS417_06420 ATP-dependent DNA ligase 0.56 PS417_17535 beta-lactamase low > 88
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS06485 ATP-dependent DNA ligase 0.58 PFLU_RS19340 MBL fold metallo-hydrolase low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS06485 ATP-dependent DNA ligase 0.58 PFLU_RS19340 MBL fold metallo-hydrolase low > 109
Pseudomonas putida KT2440 0.71 PP_1105 putative DNA ligase, ATP-dependent 0.65 PP_0052 beta-lactamase domain protein, putative hydrolase low > 96
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS21355 ATP-dependent DNA ligase 0.62 ABZR87_RS14030 MBL fold metallo-hydrolase low > 80
Variovorax sp. SCN45 0.61 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.55 GFF6926 MBL-fold metallo-hydrolase superfamily low > 127
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4922 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.64 Ac3H11_2265 FIG146518: Zn-dependent hydrolases, including glyoxylases low > 79
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS11395 ATP-dependent DNA ligase 0.67 HSERO_RS11580 beta-lactamase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF1241 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.63 GFF3377 SoxH protein, homolog low > 90
Dinoroseobacter shibae DFL-12 0.41 Dshi_2589 ATP dependent DNA ligase (RefSeq) 0.61 Dshi_2517 beta-lactamase domain protein (RefSeq) low > 64
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.3656.1 ATP-dependent DNA ligase (EC 6.5.1.1) LigC 0.44 Xcc-8004.1151.1 Beta-lactamase low > 74
Lysobacter sp. OAE881 0.39 ABIE51_RS03755 ATP-dependent DNA ligase 0.56 ABIE51_RS17110 MBL fold metallo-hydrolase low > 62
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_3851 DNA ligase, ATP-dependent, PP_1105 family 0.57 Ga0059261_0945 Zn-dependent hydrolases, including glyoxylases low > 68
Rhodopseudomonas palustris CGA009 0.27 TX73_004135 ATP-dependent DNA ligase 0.58 TX73_001890 MBL fold metallo-hydrolase low > 86
Phaeobacter inhibens DSM 17395 0.27 PGA1_262p00500 putative ATP dependent DNA ligase 0.65 PGA1_c12760 beta-lactamase hydrolase-like protein Blh low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS04120 cisplatin damage response ATP-dependent DNA ligase 0.72 A4249_RS11565 MBL fold metallo-hydrolase low > 48
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_03725 ATP-dependent DNA ligase 0.57 CCNA_02959 Zn-dependent hydrolase, glyoxalase II family low > 67
Caulobacter crescentus NA1000 0.26 CCNA_03725 ATP-dependent DNA ligase 0.57 CCNA_02959 Zn-dependent hydrolase, glyoxalase II family low > 66

Not shown: 15 genomes with orthologs for Psest_1648 only; 16 genomes with orthologs for Psest_1789 only