Conservation of cofitness between GFF3669 and GFF1720 in Sphingobium sp. HT1-2

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3669 D-arabinose-5-phosphate isomerase (EC 5.3.1.13) 1.0 GFF1720 Uncharacterized protein YaeR with similarity to glyoxylase family 0.78 6
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1667.1 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.65 Xcc-8004.3591.1 FIG01280259: hypothetical protein — —
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_02290 gutQ D-arabinose 5-phosphate isomerase 0.56 OKGIIK_07490 VOC family protein — —
Pseudomonas stutzeri RCH2 0.39 Psest_3308 KpsF/GutQ family protein 0.62 Psest_0758 Lactoylglutathione lyase and related lyases — —
Lysobacter sp. OAE881 0.39 ABIE51_RS15930 KpsF/GutQ family sugar-phosphate isomerase 0.55 ABIE51_RS00375 VOC family protein — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4270 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.56 Ac3H11_2068 FIG01280259: hypothetical protein — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_0165 KpsF/GutQ family protein 0.62 Echvi_2363 Predicted ring-cleavage extradiol dioxygenase low > 79
Erwinia amylovora T8 0.38 OLJFJH_07095 arabinose-5-phosphate isomerase KdsD 0.62 OLJFJH_00540 VOC family protein low > 58
Pseudomonas segetis P6 0.38 ACVTMO_RS19095 KpsF/GutQ family sugar-phosphate isomerase 0.61 ACVTMO_RS11525 gloA2 SMU1112c/YaeR family gloxylase I-like metalloprotein low > 75
Pantoea agglomerans CFBP13505 P0401 0.38 PagCFBP13505_RS09325 arabinose-5-phosphate isomerase KdsD 0.62 PagCFBP13505_RS13565 VOC family protein — —
Serratia liquefaciens MT49 0.37 IAI46_22445 arabinose-5-phosphate isomerase KdsD 0.69 IAI46_20160 VOC family protein low > 87
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_01922 arabinose-5-phosphate isomerase 0.59 H281DRAFT_02954 glyoxylase I family protein low > 103
Klebsiella michiganensis M5al 0.37 BWI76_RS25240 D-arabinose 5-phosphate isomerase 0.69 BWI76_RS05305 VOC family protein — —
Pantoea sp. MT58 0.37 IAI47_17160 arabinose-5-phosphate isomerase KdsD 0.62 IAI47_15440 VOC family protein — —
Erwinia tracheiphila HP pepo 2.2 0.37 IJEDHG_13765 kdsD arabinose-5-phosphate isomerase KdsD 0.59 IJEDHG_15270 VOC family protein — —
Escherichia coli ECOR38 0.37 HEPCGN_16840 kdsD arabinose-5-phosphate isomerase KdsD 0.68 HEPCGN_08075 yaeR VOC family protein low > 88
Escherichia coli ECOR27 0.37 NOLOHH_09765 kdsD arabinose-5-phosphate isomerase KdsD 0.68 NOLOHH_02465 yaeR VOC family protein low > 76
Erwinia tracheiphila SCR3 0.37 LU632_RS21255 kdsD arabinose-5-phosphate isomerase KdsD 0.60 LU632_RS19875 VOC family protein — —
Escherichia coli BW25113 0.37 b3197 kdsD D-arabinose 5-phosphate isomerase (NCBI) 0.68 b0187 yaeR orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_00503 Arabinose 5-phosphate isomerase KdsD 0.67 OHPLBJKB_03476 hypothetical protein low > 74
Pectobacterium carotovorum WPP14 0.37 HER17_RS20035 arabinose-5-phosphate isomerase KdsD 0.65 HER17_RS16250 VOC family protein — —
Escherichia coli ECRC62 0.37 BNILDI_01770 kdsD arabinose-5-phosphate isomerase KdsD 0.68 BNILDI_09205 yaeR VOC family protein low > 75
Klebsiella pneumoniae MKP103 0.37 KDGMDA_06055 arabinose-5-phosphate isomerase KdsD 0.67 KDGMDA_13550 VOC family protein low > 95
Escherichia coli BL21 0.37 ECD_03062 D-arabinose 5-phosphate isomerase 0.68 ECD_00185 putative lyase low > 61
Escherichia fergusonii Becca 0.37 EFB2_00626 Arabinose 5-phosphate isomerase KdsD 0.68 EFB2_03857 hypothetical protein low > 86
Escherichia coli ECRC100 0.37 OKFHMN_17965 kdsD arabinose-5-phosphate isomerase KdsD 0.68 OKFHMN_10120 yaeR VOC family protein low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF2941 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.68 GFF34 FIG01280259: hypothetical protein low > 78
Escherichia coli ECRC98 0.37 JDDGAC_21590 kdsD arabinose-5-phosphate isomerase KdsD 0.68 JDDGAC_13715 yaeR VOC family protein low > 87
Escherichia coli ECRC99 0.37 KEDOAH_10185 kdsD arabinose-5-phosphate isomerase KdsD 0.68 KEDOAH_18035 yaeR VOC family protein — —
Escherichia coli ECRC101 0.37 MCAODC_08485 kdsD arabinose-5-phosphate isomerase KdsD 0.68 MCAODC_00635 yaeR VOC family protein low > 87
Escherichia coli ECRC102 0.37 NIAGMN_15725 kdsD arabinose-5-phosphate isomerase KdsD 0.68 NIAGMN_07970 yaeR VOC family protein low > 80
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS19830 sugar phosphate isomerase 0.58 HSERO_RS02665 hypothetical protein — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS18400 arabinose-5-phosphate isomerase KdsD 0.68 ECOLIN_RS01015 VOC family protein low > 55
Dickeya dianthicola 67-19 0.37 HGI48_RS01470 arabinose-5-phosphate isomerase KdsD 0.66 HGI48_RS05200 VOC family protein — —
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3251 KpsF/GutQ family protein 0.70 EX28DRAFT_3775 Lactoylglutathione lyase and related lyases low > 76
Rahnella sp. WP5 0.37 EX31_RS12425 arabinose-5-phosphate isomerase KdsD 0.69 EX31_RS12945 VOC family protein — —
Enterobacter sp. TBS_079 0.37 MPMX20_04103 Arabinose 5-phosphate isomerase KdsD 0.69 MPMX20_00871 hypothetical protein low > 85
Dickeya dianthicola ME23 0.37 DZA65_RS01535 arabinose-5-phosphate isomerase KdsD 0.66 DZA65_RS05540 VOC family protein — —
Dickeya dadantii 3937 0.36 DDA3937_RS01555 arabinose-5-phosphate isomerase KdsD 0.67 DDA3937_RS05200 VOC family protein — —
Shewanella oneidensis MR-1 0.36 SO3956 carbohydrate isomerase, KpsF/GutQ family (NCBI ptt file) 0.60 SO2155 glyoxalase family protein (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_12790 KpsF/GutQ family sugar-phosphate isomerase 0.60 CSW01_18595 VOC family protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS08900 D-arabinose 5-phosphate isomerase 0.69 CA265_RS05200 hypothetical protein low > 88
Shewanella sp. ANA-3 0.36 Shewana3_0677 KpsF/GutQ family protein (RefSeq) 0.55 Shewana3_2315 glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq) — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00832 Arabinose 5-phosphate isomerase KdsD 0.65 MIT1002_03753 putative lyase — —
Cellulophaga baltica 18 0.35 M666_RS10585 KpsF/GutQ family sugar-phosphate isomerase 0.60 M666_RS15400 VOC family protein — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS12810 SIS domain-containing protein 0.60 ABZR88_RS09770 VOC family protein — —

Not shown: 66 genomes with orthologs for GFF3669 only; 0 genomes with orthologs for GFF1720 only