Conservation of cofitness between Psest_0212 and Psest_1525 in Pseudomonas stutzeri RCH2

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0212 exodeoxyribonuclease V, gamma subunit 1.0 Psest_1525 Uncharacterized protein conserved in bacteria 0.33 1
Pseudomonas sp. S08-1 0.69 OH686_12080 exodeoxyribonuclease V, gamma subunit 0.68 OH686_19585 DNA recombination protein RmuC low > 80
Klebsiella michiganensis M5al 0.27 BWI76_RS23240 exonuclease V subunit gamma 0.34 BWI76_RS01300 DNA recombination protein RmuC 0.33 89
Pectobacterium carotovorum WPP14 0.26 HER17_RS16535 exodeoxyribonuclease V subunit gamma 0.35 HER17_RS20615 DNA recombination protein RmuC low > 75
Serratia liquefaciens MT49 0.26 IAI46_20415 exodeoxyribonuclease V subunit gamma 0.32 IAI46_01060 DNA recombination protein RmuC — —
Shewanella loihica PV-4 0.26 Shew_2129 exodeoxyribonuclease V, gamma subunit (RefSeq) 0.35 Shew_2124 hypothetical protein (RefSeq) — —
Erwinia tracheiphila SCR3 0.25 LU632_RS06180 recC exodeoxyribonuclease V subunit gamma 0.32 LU632_RS24010 rmuC DNA recombination protein RmuC — —
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_11785 exonuclease V subunit gamma 0.38 CSW01_00440 DNA recombination protein RmuC low > 62
Pseudomonas putida KT2440 0.23 PP_4674 ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit 0.67 PP_1694 DNA recombination limiting inversions protein — —
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_5152 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 0.69 PfGW456L13_4224 DNA recombination protein RmuC low > 87
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_06050 exodeoxyribonuclease V subunit gamma 0.71 AO353_02560 recombinase RmuC low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_0680 DNA helicase/exodeoxyribonuclease V, gamma subunit 0.70 Psyr_3666 Protein of unknown function DUF195 low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_0680 DNA helicase/exodeoxyribonuclease V, gamma subunit 0.70 Psyr_3666 Protein of unknown function DUF195 low > 86
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_1236 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 0.69 Pf1N1B4_3724 DNA recombination protein RmuC low > 87
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_3461 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 0.67 Pf6N2E2_5759 DNA recombination protein RmuC low > 103
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_07920 exodeoxyribonuclease V subunit gamma 0.69 AO356_19220 recombinase RmuC low > 104
Pseudomonas sp. RS175 0.22 PFR28_00006 RecBCD enzyme subunit RecC 0.67 PFR28_03190 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.22 PFLU_RS25595 exodeoxyribonuclease V subunit gamma 0.70 PFLU_RS21940 DNA recombination protein RmuC low > 109
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS25595 exodeoxyribonuclease V subunit gamma 0.70 PFLU_RS21940 DNA recombination protein RmuC low > 109
Pseudomonas simiae WCS417 0.22 PS417_23780 exodeoxyribonuclease V subunit gamma 0.70 PS417_19970 recombinase RmuC — —
Rahnella sp. WP5 0.21 EX31_RS20740 exodeoxyribonuclease V subunit gamma 0.34 EX31_RS14630 DNA recombination protein RmuC — —
Dickeya dianthicola 67-19 0.21 HGI48_RS11105 exodeoxyribonuclease V subunit gamma 0.33 HGI48_RS00890 DNA recombination protein RmuC — —
Castellaniella sp019104865 MT123 0.21 ABCV34_RS02960 exodeoxyribonuclease V subunit gamma 0.25 ABCV34_RS13825 DNA recombination protein RmuC 0.24 48
Dickeya dianthicola ME23 0.21 DZA65_RS11485 exodeoxyribonuclease V subunit gamma 0.33 DZA65_RS00950 DNA recombination protein RmuC — —
Lysobacter sp. OAE881 0.19 ABIE51_RS01020 exodeoxyribonuclease V subunit gamma 0.27 ABIE51_RS00985 DNA recombination protein RmuC low > 62
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS07970 exodeoxyribonuclease V subunit gamma 0.06 BPHYT_RS14515 DNA recombination protein RmuC — —
Rhodanobacter denitrificans MT42 0.18 LRK55_RS01925 exodeoxyribonuclease V subunit gamma 0.26 LRK55_RS06675 DNA recombination protein RmuC low > 63
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS23195 exodeoxyribonuclease V subunit gamma 0.08 QEN71_RS04465 DNA recombination protein RmuC — —
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.5354.1 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) 0.06 Xcc-8004.5376.1 DNA recombination protein RmuC — —

Not shown: 29 genomes with orthologs for Psest_0212 only; 8 genomes with orthologs for Psest_1525 only