Conservation of cofitness between Psest_3761 and Psest_1512 in Pseudomonas stutzeri RCH2

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3761 Transcription elongation factor 1.0 Psest_1512 Predicted permease 0.22 3
Pseudomonas putida KT2440 0.68 PP_5223 regulator of nucleotide diphosphokinase 0.65 PP_1234 putative permease low > 96
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_0178 regulator of nucleoside diphosphate kinase 0.69 Psyr_1545 Protein of unknown function UPF0118 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_0178 regulator of nucleoside diphosphate kinase 0.69 Psyr_1545 Protein of unknown function UPF0118 low > 86
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_12755 nucleoside diphosphate kinase regulator 0.69 AO356_04545 permease low > 104
Pseudomonas sp. RS175 0.65 PFR28_04372 Regulator of nucleoside diphosphate kinase 0.66 PFR28_00696 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_09025 nucleoside diphosphate kinase regulator 0.61 AO353_17655 permease low > 101
Pseudomonas simiae WCS417 0.63 PS417_27565 nucleoside diphosphate kinase regulator 0.66 PS417_07150 permase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_849 Regulator of nucleoside diphosphate kinase 0.66 PfGW456L13_4510 Putative permease PerM (= YfgO) low > 87
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_2178 Regulator of nucleoside diphosphate kinase 0.71 Pf1N1B4_3329 Putative permease PerM (= YfgO) low > 87
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_4424 Regulator of nucleoside diphosphate kinase 0.70 Pf6N2E2_2750 Putative permease PerM (= YfgO) low > 103
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.66 PFLU_RS07260 AI-2E family transporter low > 109
Pseudomonas fluorescens SBW25 0.60 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.66 PFLU_RS07260 AI-2E family transporter low > 109
Shewanella oneidensis MR-1 0.49 SO1935 rnk regulator of nucleoside diphosphate kinase (NCBI ptt file) 0.39 SO2867 permease PerM, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.48 Shewana3_1714 GreA/GreB family elongation factor (RefSeq) 0.40 Shewana3_1651 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.47 Sama_1433 GreA/GreB family elongation factor (RefSeq) 0.43 Sama_1911 hypothetical protein (RefSeq) low > 62
Enterobacter sp. TBS_079 0.40 MPMX20_01276 Regulator of nucleoside diphosphate kinase 0.45 MPMX20_03343 Putative transport protein YhhT low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4522 Regulator of nucleoside diphosphate kinase 0.44 GFF2176 Putative permease PerM (= YfgO) low > 78
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2346 Transcription elongation factor 0.45 EX28DRAFT_0179 Predicted permease — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_17255 nucleoside diphosphate kinase regulator 0.47 CSW01_10775 AI-2E family transporter low > 62
Escherichia coli ECRC101 0.39 MCAODC_26700 rnk nucleoside diphosphate kinase regulator 0.44 MCAODC_12370 perM Putative permease PerM — —
Klebsiella michiganensis M5al 0.39 BWI76_RS07955 nucleoside diphosphate kinase regulator 0.45 BWI76_RS20920 AI-2E family transporter low > 92
Escherichia coli ECRC99 0.39 KEDOAH_20485 rnk nucleoside diphosphate kinase regulator 0.44 KEDOAH_06380 perM Putative permease PerM — —
Escherichia coli ECRC102 0.39 NIAGMN_05540 rnk nucleoside diphosphate kinase regulator 0.44 NIAGMN_19610 perM Putative permease PerM — —
Escherichia coli BL21 0.39 ECD_00578 regulator of nucleoside diphosphate kinase 0.44 ECD_02385 putative UPF0118 family inner membrane permease — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03095 Regulator of nucleoside diphosphate kinase 0.44 OHPLBJKB_01233 Putative transport protein YhhT low > 73
Escherichia coli ECRC101 0.39 OKFHMN_07485 rnk nucleoside diphosphate kinase regulator 0.44 OKFHMN_21840 perM Putative permease PerM — —
Escherichia coli ECRC62 0.39 BNILDI_21870 rnk nucleoside diphosphate kinase regulator 0.44 BNILDI_12300 perM Putative permease PerM — —
Escherichia coli BW25113 0.39 b0610 rnk nucleoside diphosphate kinase regulator (NCBI) 0.44 b2493 yfgO predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.39 NOLOHH_23860 rnk nucleoside diphosphate kinase regulator 0.44 NOLOHH_13490 perM Putative permease PerM — —
Escherichia coli ECOR38 0.39 HEPCGN_00790 rnk nucleoside diphosphate kinase regulator 0.44 HEPCGN_21005 perM Putative permease PerM — —
Escherichia coli ECRC98 0.39 JDDGAC_11130 rnk nucleoside diphosphate kinase regulator 0.44 JDDGAC_25785 perM Putative permease PerM — —
Escherichia coli Nissle 1917 0.39 ECOLIN_RS03335 nucleoside diphosphate kinase regulator 0.44 ECOLIN_RS14160 AI-2E family transporter — —
Escherichia fergusonii Becca 0.39 EFB2_03482 Regulator of nucleoside diphosphate kinase 0.44 EFB2_01405 Putative transport protein YhhT low > 86
Serratia liquefaciens MT49 0.36 IAI46_22555 nucleoside diphosphate kinase regulator 0.44 IAI46_18795 AI-2E family transporter low > 86
Rahnella sp. WP5 0.35 EX31_RS12330 nucleoside diphosphate kinase regulator 0.46 EX31_RS22725 AI-2E family transporter low > 89
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS13215 elongation factor GreAB 0.11 BPHYT_RS28000 permease — —
Alteromonas macleodii MIT1002 0.23 MIT1002_03243 Regulator of nucleoside diphosphate kinase 0.45 MIT1002_02210 pheromone autoinducer 2 transporter low > 70

Not shown: 32 genomes with orthologs for Psest_3761 only; 4 genomes with orthologs for Psest_1512 only