Conservation of cofitness between PS417_06965 and PS417_07315 in Pseudomonas simiae WCS417

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_06965 cysteine methyltransferase 1.0 PS417_07315 LysR family transcriptional regulator 0.20 4
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS07030 methylated-DNA--[protein]-cysteine S-methyltransferase 0.98 PFLU_RS07425 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS07030 methylated-DNA--[protein]-cysteine S-methyltransferase 0.98 PFLU_RS07425 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_15075 cysteine methyltransferase 0.84 AO353_03885 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3240 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.84 Pf6N2E2_5561 LysR-family transcriptional regulator clustered with PA0057 low > 103
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_4080 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.87 Pf1N1B4_700 LysR-family transcriptional regulator clustered with PA0057 — —
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_06890 cysteine methyltransferase 0.85 AO356_18185 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_2670 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.87 PfGW456L13_1790 LysR-family transcriptional regulator clustered with PA0057 low > 87
Pseudomonas putida KT2440 0.70 PP_3017 O6-methylguanine-DNA methyltransferase 0.79 PP_1391 Transcriptional regulator, LysR family 0.14 64
Pseudomonas sp. RS175 0.69 PFR28_03616 Methylated-DNA--protein-cysteine methyltransferase 0.85 PFR28_03380 HTH-type transcriptional regulator DmlR low > 88
Rahnella sp. WP5 0.65 EX31_RS08260 methylated-DNA--[protein]-cysteine S-methyltransferase 0.57 EX31_RS13290 LysR family transcriptional regulator low > 89
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_03820 methylated-DNA-[protein]-cysteine S-methyltransferase 0.35 H281DRAFT_03714 transcriptional regulator, LysR family low > 103
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS00275 methylated-DNA--protein-cysteine methyltransferase 0.63 HSERO_RS23200 LysR family transcriptional regulator low > 78
Pantoea sp. MT58 0.58 IAI47_13640 methylated-DNA--[protein]-cysteine S-methyltransferase 0.38 IAI47_19460 LysR family transcriptional regulator low > 76
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_19180 cysteine methyltransferase 0.37 CSW01_19365 LysR family transcriptional regulator low > 62
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1829.1 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.33 Xcc-8004.4646.1 Transcriptional regulator, LysR family low > 74
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS17080 methylated-DNA--[protein]-cysteine S-methyltransferase 0.33 QEN71_RS19275 LysR family transcriptional regulator low > 153
Variovorax sp. OAS795 0.42 ABID97_RS21395 methylated-DNA--[protein]-cysteine S-methyltransferase 0.67 ABID97_RS17535 LysR family transcriptional regulator low > 91
Shewanella oneidensis MR-1 0.39 SO3126 ogt methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) 0.47 SO3473 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.39 HGI48_RS10895 methylated-DNA--[protein]-cysteine S-methyltransferase 0.51 HGI48_RS09645 LysR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.39 DZA65_RS11355 methylated-DNA--[protein]-cysteine S-methyltransferase 0.50 DZA65_RS09955 LysR family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.38 IAI46_13245 methylated-DNA--[protein]-cysteine S-methyltransferase 0.58 IAI46_20535 LysR family transcriptional regulator low > 86
Dickeya dadantii 3937 0.38 DDA3937_RS10945 methylated-DNA--[protein]-cysteine S-methyltransferase 0.51 DDA3937_RS09635 LysR family transcriptional regulator low > 74
Variovorax sp. SCN45 0.38 GFF6534 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.66 GFF477 Transcriptional regulator, LysR family low > 127
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS21500 cysteine methyltransferase 0.53 RR42_RS28210 LysR family transcriptional regulator low > 128
Klebsiella michiganensis M5al 0.36 BWI76_RS16180 methylated-DNA--protein-cysteine methyltransferase 0.37 BWI76_RS13845 LysR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS04945 methylated-DNA--[protein]-cysteine S-methyltransferase 0.56 RALBFv3_RS00595 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS08680 methylated-DNA--[protein]-cysteine S-methyltransferase 0.56 UW163_RS13925 LysR family transcriptional regulator — —
Pectobacterium carotovorum WPP14 0.34 HER17_RS10530 methylated-DNA--[protein]-cysteine S-methyltransferase 0.57 HER17_RS03700 LysR family transcriptional regulator low > 75
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS00565 methylated-DNA--[protein]-cysteine S-methyltransferase 0.54 ABZR87_RS12110 LysR family transcriptional regulator low > 80

Not shown: 40 genomes with orthologs for PS417_06965 only; 9 genomes with orthologs for PS417_07315 only