| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF2571 | | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake | 1.0 | GFF1131 | | Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA | 0.53 | 20 |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_4411 | | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake | 0.74 | Ac3H11_4611 | | Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA | low | > 79 |
| Variovorax sp. SCN45 | 0.53 | GFF5489 | | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake | 0.82 | GFF4056 | | Copper/silver efflux RND transporter, transmembrane protein CusA | low | > 127 |
| Ralstonia solanacearum IBSBF1503 | 0.48 | RALBFv3_RS09755 | | DNA-protecting protein DprA | 0.76 | RALBFv3_RS23440 | | CusA/CzcA family heavy metal efflux RND transporter | low | > 76 |
| Ralstonia solanacearum UW163 | 0.48 | UW163_RS03825 | | DNA-protecting protein DprA | 0.76 | UW163_RS16690 | | CusA/CzcA family heavy metal efflux RND transporter | — | — |
| Ralstonia solanacearum GMI1000 | 0.48 | RS_RS00340 | | DNA-protecting protein DprA | 0.77 | RS_RS21560 | | CusA/CzcA family heavy metal efflux RND transporter | low | > 80 |
| Dechlorosoma suillum PS | 0.47 | Dsui_0819 | | DNA protecting protein DprA | 0.56 | Dsui_2635 | | heavy metal efflux pump, cobalt-zinc-cadmium | low | > 51 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS23610 | | DNA-protecting protein DprA | 0.78 | RPSI07_RS03870 | | CusA/CzcA family heavy metal efflux RND transporter | low | > 81 |
| Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS09785 | | DNA-processing protein DprA | 0.64 | LRK55_RS16925 | | efflux RND transporter permease subunit | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.40 | LRK54_RS10145 | | DNA-processing protein DprA | 0.63 | LRK54_RS01915 | | CusA/CzcA family heavy metal efflux RND transporter | low | > 59 |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_0025 | | DNA protecting protein DprA | 0.75 | Psest_2263 | | heavy metal efflux pump (cobalt-zinc-cadmium) | low | > 67 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_13770 | dprA | DNA-processing protein DprA | 0.64 | OKGIIK_06220 | cusA | CusA/CzcA family heavy metal efflux RND transporter | low | > 52 |
| Dickeya dianthicola 67-19 | 0.35 | HGI48_RS19210 | | DNA-protecting protein DprA | 0.67 | HGI48_RS03505 | | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | low | > 71 |
| Dickeya dianthicola ME23 | 0.34 | DZA65_RS20335 | | DNA-protecting protein DprA | 0.67 | DZA65_RS03615 | | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | low | > 75 |
| Dickeya dadantii 3937 | 0.34 | DDA3937_RS19120 | | DNA-protecting protein DprA | 0.70 | DDA3937_RS06575 | | efflux RND transporter permease subunit | low | > 74 |
| Shewanella sp. ANA-3 | 0.34 | Shewana3_0037 | | DNA protecting protein DprA (RefSeq) | 0.67 | Shewana3_4300 | | CzcA family heavy metal efflux protein (RefSeq) | low | > 73 |
| Pseudomonas putida KT2440 | 0.34 | PP_0069 | | putative Rossmann fold nucleotide-binding protein | 0.73 | PP_5387 | | probable copper efflux transporter, CzcA family | low | > 96 |
| Klebsiella michiganensis M5al | 0.33 | BWI76_RS25665 | | DNA-processing protein DprA | 0.70 | BWI76_RS15140 | | CusA/CzcA family heavy metal efflux RND transporter | low | > 92 |
| Shewanella oneidensis MR-1 | 0.33 | SO0034 | | DNA processing protein DprA, putative (NCBI ptt file) | 0.62 | SO4598 | | heavy metal efflux pump, CzcA family (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.33 | MIT1002_00022 | | DNA protecting protein DprA | 0.63 | MIT1002_00252 | | Cation efflux system protein CusA | low | > 70 |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS02230 | | DNA-protecting protein DprA | 0.70 | HER17_RS14795 | | efflux RND transporter permease subunit | low | > 75 |
| Shewanella amazonensis SB2B | 0.32 | Sama_0045 | | DNA processing protein DprA, putative (RefSeq) | 0.63 | Sama_3475 | | CzcA family heavy metal efflux protein (RefSeq) | low | > 62 |
| Pseudomonas fluorescens GW456-L13 | 0.32 | PfGW456L13_648 | | Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake | 0.75 | PfGW456L13_3708 | | Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA | low | > 87 |
| Escherichia coli ECRC101 | 0.32 | MCAODC_08065 | dprA | DNA-protecting protein DprA | 0.68 | MCAODC_26900 | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | — | — |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_15305 | dprA | DNA-protecting protein DprA | 0.68 | NIAGMN_05740 | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | — | — |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_21165 | dprA | DNA-protecting protein DprA | 0.63 | JDDGAC_11330 | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | — | — |
| Escherichia coli ECOR38 | 0.32 | HEPCGN_16365 | dprA | DNA-protecting protein DprA | 0.68 | HEPCGN_00605 | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | low | > 85 |
| Escherichia coli BW25113 | 0.32 | b4473 | smf | hypothetical protein (NCBI) | 0.68 | b0575 | cusA | copper/silver efflux system, membrane component (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.32 | ECOLIN_RS18860 | | DNA-protecting protein DprA | 0.68 | ECOLIN_RS03145 | | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | low | > 52 |
| Escherichia fergusonii Becca | 0.32 | EFB2_00538 | | hypothetical protein | 0.68 | EFB2_03519 | | Cation efflux system protein CusA | low | > 86 |
| Escherichia coli BL21 | 0.32 | ECD_03136 | | DNA recombination-mediator A family protein | 0.68 | ECD_00536 | | copper/silver efflux system, membrane component | low | > 60 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.32 | OHPLBJKB_00418 | | hypothetical protein | 0.68 | OHPLBJKB_03134 | | Cation efflux system protein CusA | low | > 73 |
| Escherichia coli ECRC62 | 0.32 | BNILDI_02185 | dprA | DNA-protecting protein DprA | 0.68 | BNILDI_22075 | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | — | — |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_10605 | dprA | DNA-protecting protein DprA | 0.68 | KEDOAH_20285 | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | — | — |
| Escherichia coli ECOR27 | 0.31 | NOLOHH_09335 | dprA | DNA-protecting protein DprA | 0.68 | NOLOHH_24065 | cusA | Cu(+)/Ag(+) efflux RND transporter permease subunit CusA | low | > 57 |
| Enterobacter asburiae PDN3 | 0.31 | EX28DRAFT_0042 | | DNA protecting protein DprA | 0.68 | EX28DRAFT_1169 | | heavy metal efflux pump, CzcA family | low | > 76 |
| Shewanella loihica PV-4 | 0.31 | Shew_3734 | | DNA protecting protein DprA (RefSeq) | 0.62 | Shew_3534 | | CzcA family heavy metal efflux protein (RefSeq) | low | > 60 |
| Enterobacter sp. TBS_079 | 0.30 | MPMX20_04193 | | hypothetical protein | 0.66 | MPMX20_02315 | | Cation efflux system protein CusA | low | > 85 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.29 | A4249_RS04240 | | DNA-processing protein DprA | 0.71 | A4249_RS03365 | | efflux RND transporter permease subunit | low | > 48 |
| Sphingomonas koreensis DSMZ 15582 | 0.28 | Ga0059261_2448 | | DNA protecting protein DprA | 0.72 | Ga0059261_0467 | | heavy metal efflux pump, CzcA family | low | > 68 |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_01508 | | hypothetical protein | 0.57 | MPMX19_06407 | | Cation efflux system protein CusA | low | > 112 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.25 | ABZR88_RS13955 | | DNA-processing protein DprA | 0.45 | ABZR88_RS19605 | | efflux RND transporter permease subunit | low | > 71 |
| Rhodopseudomonas palustris CGA009 | 0.25 | TX73_016135 | | DNA-processing protein DprA | 0.56 | TX73_007285 | | CusA/CzcA family heavy metal efflux RND transporter | low | > 86 |
Not shown: 45 genomes with orthologs for GFF2571 only; 5 genomes with orthologs for GFF1131 only