Conservation of cofitness between GFF4028 and GFF1082 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4028 Flagellar hook-associated protein FliD 1.0 GFF1082 Putative alanine/glycine transport protein 0.77 14
Escherichia coli ECOR27 0.75 NOLOHH_16390 fliD flagellar filament capping protein FliD 0.74 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ low > 57
Escherichia fergusonii Becca 0.47 EFB2_02021 Flagellar hook-associated protein 2 0.73 EFB2_04036 Amino-acid carrier protein AlsT low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01805 Flagellar hook-associated protein 2 0.74 OHPLBJKB_03653 Amino-acid carrier protein AlsT low > 73
Escherichia coli ECRC101 0.46 MCAODC_19620 fliD flagellar filament capping protein FliD 0.74 MCAODC_01600 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli ECRC98 0.46 JDDGAC_00360 fliD flagellar filament capping protein FliD 0.74 JDDGAC_14680 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli ECRC101 0.46 OKFHMN_25770 fliD flagellar filament capping protein FliD 0.74 OKFHMN_11085 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli ECRC102 0.46 NIAGMN_02280 fliD flagellar filament capping protein FliD 0.74 NIAGMN_08935 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli ECRC99 0.46 KEDOAH_02320 fliD flagellar filament capping protein FliD 0.74 KEDOAH_17070 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli BW25113 0.45 b1924 fliD flagellar capping protein (NCBI) 0.74 b0007 yaaJ predicted transporter (NCBI) low > 76
Escherichia coli ECRC62 0.45 BNILDI_15180 fliD flagellar filament capping protein FliD 0.74 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS10985 flagellar filament capping protein FliD 0.73 ECOLIN_RS00040 sodium:alanine symporter family protein — —
Escherichia coli ECOR38 0.44 HEPCGN_04125 fliD flagellar filament capping protein FliD 0.74 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ low > 85
Rahnella sp. WP5 0.40 EX31_RS09460 flagellar filament capping protein FliD 0.41 EX31_RS03925 alanine:cation symporter family protein low > 89
Serratia liquefaciens MT49 0.38 IAI46_15795 flagellar filament capping protein FliD 0.54 IAI46_03050 sodium:alanine symporter family protein low > 86
Enterobacter asburiae PDN3 0.37 EX28DRAFT_0622 Flagellar capping protein 0.73 EX28DRAFT_3619 amino acid carrier protein low > 76
Enterobacter sp. TBS_079 0.36 MPMX20_02855 Flagellar hook-associated protein 2 0.70 MPMX20_00715 Amino-acid carrier protein AlsT low > 85
Castellaniella sp019104865 MT123 0.23 ABCV34_RS05615 flagellar filament capping protein FliD 0.22 ABCV34_RS11085 sodium:alanine symporter family protein low > 48
Pseudomonas stutzeri RCH2 0.21 Psest_2505 Flagellar capping protein 0.39 Psest_4077 amino acid carrier protein low > 67
Pseudomonas putida KT2440 0.16 PP_4376 flagellar filament capping protein 0.37 PP_0496 Sodium/alanine symporter low > 96
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_4360 Flagellar hook-associated protein FliD 0.38 PfGW456L13_741 sodium/alanine transporter low > 87
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_18645 flagellar cap protein FliD 0.38 AO353_09955 sodium:alanine symporter low > 101
Shewanella oneidensis MR-1 0.14 SO3235 fliD flagellar hook-associated protein FliD (NCBI ptt file) 0.47 SO3541 sodium:alanine symporter family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.14 Sama_2304 flagellar hook-associated 2-like protein (RefSeq) 0.48 Sama_0916 sodium:alanine symporter family protein (RefSeq) low > 62
Shewanella loihica PV-4 0.14 Shew_1359 flagellar hook-associated 2 domain-containing protein (RefSeq) 0.42 Shew_1092 amino acid carrier protein (RefSeq) low > 60
Pseudomonas simiae WCS417 0.14 PS417_19840 flagellar cap protein FliD 0.38 PS417_28135 sodium:alanine symporter low > 88
Shewanella sp. ANA-3 0.13 Shewana3_1335 flagellar hook-associated 2 domain-containing protein (RefSeq) 0.47 Shewana3_3144 amino acid carrier protein (RefSeq) low > 73
Pseudomonas fluorescens FW300-N1B4 0.13 Pf1N1B4_3596 Flagellar hook-associated protein FliD 0.39 Pf1N1B4_2024 sodium/alanine transporter low > 87
Pseudomonas sp. RS175 0.13 PFR28_00825 B-type flagellar hook-associated protein 2 0.39 PFR28_04500 Amino-acid carrier protein AlsT low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.13 Psyr_3464 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN 0.41 Psyr_5052 Sodium:alanine symporter low > 86
Pseudomonas fluorescens FW300-N2E2 0.13 Pf6N2E2_2600 Flagellar hook-associated protein FliD 0.39 Pf6N2E2_4086 sodium/alanine transporter low > 103
Pseudomonas syringae pv. syringae B728a 0.13 Psyr_3464 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN 0.41 Psyr_5052 Sodium:alanine symporter low > 86
Pseudomonas fluorescens SBW25 0.13 PFLU_RS21810 flagellar filament capping protein FliD 0.38 PFLU_RS29820 alanine:cation symporter family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS21810 flagellar filament capping protein FliD 0.38 PFLU_RS29820 alanine:cation symporter family protein low > 109
Paraburkholderia sabiae LMG 24235 0.12 QEN71_RS29095 flagellar filament capping protein FliD 0.18 QEN71_RS14800 amino acid carrier protein low > 153
Pseudomonas fluorescens FW300-N2C3 0.12 AO356_03870 flagellar hook protein FliD 0.39 AO356_11095 sodium:alanine symporter low > 104
Alteromonas macleodii MIT1002 0.11 MIT1002_01056 Flagellar cap protein 0.41 MIT1002_01494 Amino-acid carrier protein AlsT low > 70
Xanthomonas campestris pv. campestris strain 8004 0.10 Xcc-8004.2791.1 Flagellar hook-associated protein FliD 0.31 Xcc-8004.1265.1 sodium/alanine symporter family protein low > 74

Not shown: 20 genomes with orthologs for GFF4028 only; 19 genomes with orthologs for GFF1082 only