Conservation of cofitness between EX31_RS21460 and EX31_RS08690 in Rahnella sp. WP5

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21460 LysR family transcriptional regulator ArgP 1.0 EX31_RS08690 translocation/assembly module TamB 0.79 13
Serratia liquefaciens MT49 0.93 IAI46_20910 LysR family transcriptional regulator ArgP 0.73 IAI46_01775 translocation/assembly module TamB low > 86
Pantoea sp. MT58 0.92 IAI47_03715 LysR family transcriptional regulator ArgP 0.66 IAI47_02720 translocation/assembly module TamB low > 76
Pectobacterium carotovorum WPP14 0.92 HER17_RS02715 LysR family transcriptional regulator ArgP 0.65 HER17_RS03985 translocation/assembly module TamB 0.71 45
Dickeya dadantii 3937 0.91 DDA3937_RS18490 LysR family transcriptional regulator ArgP 0.55 DDA3937_RS17155 translocation/assembly module TamB low > 74
Dickeya dianthicola ME23 0.91 DZA65_RS19550 LysR family transcriptional regulator ArgP 0.54 DZA65_RS18290 translocation/assembly module TamB low > 75
Enterobacter sp. TBS_079 0.91 MPMX20_03773 HTH-type transcriptional regulator ArgP 0.65 MPMX20_00504 Translocation and assembly module subunit TamB low > 85
Erwinia tracheiphila SCR3 0.91 LU632_RS05845 LysR family transcriptional regulator ArgP 0.66 LU632_RS02110 translocation/assembly module TamB low > 74
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2967 transcriptional regulator, ArgP family 0.65 EX28DRAFT_3407 Uncharacterized protein conserved in bacteria low > 76
Dickeya dianthicola 67-19 0.91 HGI48_RS18415 LysR family transcriptional regulator ArgP 0.54 HGI48_RS17210 translocation/assembly module TamB low > 71
Klebsiella michiganensis M5al 0.91 BWI76_RS23930 transcriptional regulator ArgP 0.63 BWI76_RS02780 translocation and assembly module TamB low > 92
Escherichia coli ECRC100 0.90 OKFHMN_19450 argP DNA-binding transcriptional regulator ArgP 0.63 OKFHMN_11995 tamB autotransporter assembly complex protein TamB low > 80
Escherichia coli BW25113 0.90 b2916 argP chromosome replication initiation inhibitor protein (NCBI) 0.63 b4221 ytfN hypothetical protein (NCBI) low > 76
Escherichia coli ECRC99 0.90 KEDOAH_08690 argP DNA-binding transcriptional regulator ArgP 0.63 KEDOAH_16160 tamB autotransporter assembly complex protein TamB — —
Escherichia coli BL21 0.90 ECD_02747 transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 0.63 ECD_04092 translocation and assembly module for autotransporter export, inner membrane subunit low > 61
Escherichia coli ECOR38 0.90 HEPCGN_18750 argP DNA-binding transcriptional regulator ArgP 0.63 HEPCGN_10195 tamB autotransporter assembly complex protein TamB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3015 Chromosome initiation inhibitor 0.64 GFF875 Uncharacterized protein YtfN low > 78
Escherichia coli ECRC98 0.90 JDDGAC_23090 argP DNA-binding transcriptional regulator ArgP 0.63 JDDGAC_15635 tamB autotransporter assembly complex protein TamB low > 86
Escherichia coli ECRC102 0.90 NIAGMN_17215 argP DNA-binding transcriptional regulator ArgP 0.63 NIAGMN_09845 tamB autotransporter assembly complex protein TamB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_00800 HTH-type transcriptional regulator ArgP 0.63 OHPLBJKB_03812 Translocation and assembly module subunit TamB low > 73
Escherichia coli ECOR27 0.90 NOLOHH_11355 argP DNA-binding transcriptional regulator ArgP 0.63 NOLOHH_04255 tamB autotransporter assembly complex protein TamB low > 75
Escherichia coli ECRC62 0.90 BNILDI_09890 argP DNA-binding transcriptional regulator ArgP 0.63 BNILDI_07260 tamB autotransporter assembly complex protein TamB low > 75
Escherichia fergusonii Becca 0.90 EFB2_00987 HTH-type transcriptional regulator ArgP 0.63 EFB2_04308 Translocation and assembly module subunit TamB low > 86
Escherichia coli ECRC101 0.90 MCAODC_09970 argP DNA-binding transcriptional regulator ArgP 0.63 MCAODC_02510 tamB autotransporter assembly complex protein TamB low > 87
Escherichia coli Nissle 1917 0.90 ECOLIN_RS16225 DNA-binding transcriptional regulator ArgP 0.63 ECOLIN_RS24515 autotransporter assembly complex protein TamB — —
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02560 chromosome initiation inhibitor 0.30 CSW01_12900 DUF490 domain-containing protein low > 62
Shewanella amazonensis SB2B 0.39 Sama_2987 chromosome replication initiation inhibitor protein (RefSeq) 0.15 Sama_1615 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.34 Shew_1844 chromosome replication initiation inhibitor protein (RefSeq) 0.16 Shew_2173 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.33 SO2866 iciA chromosome initiation inhibitor (NCBI ptt file) 0.15 SO2113 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1652 chromosome replication initiation inhibitor protein (RefSeq) 0.12 Shewana3_1893 hypothetical protein (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_04995 LysR family transcriptional regulator 0.14 AO356_01045 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_708 Chromosome initiation inhibitor 0.14 Pf1N1B4_3998 putative exported protein low > 87
Pseudomonas sp. RS175 0.30 PFR28_00608 HTH-type transcriptional regulator ArgP 0.13 PFR28_02751 Translocation and assembly module subunit TamB low > 88
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_1782 Chromosome initiation inhibitor 0.13 PfGW456L13_2602 putative exported protein low > 87
Pseudomonas simiae WCS417 0.30 PS417_22165 LysR family transcriptional regulator 0.13 PS417_16965 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_03915 LysR family transcriptional regulator 0.13 AO353_27860 hypothetical protein 0.20 83
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_2849 Chromosome initiation inhibitor 0.13 Pf6N2E2_145 putative exported protein low > 103
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.13 PFLU_RS18915 translocation/assembly module TamB low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.13 PFLU_RS18915 translocation/assembly module TamB low > 109
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.14 Psyr_2479 Protein of unknown function DUF490 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.14 Psyr_2479 Protein of unknown function DUF490 low > 86
Alteromonas macleodii MIT1002 0.25 MIT1002_00129 OriC replication inhibitor 0.13 MIT1002_04049 Autotransporter assembly factor TamB low > 70

Not shown: 29 genomes with orthologs for EX31_RS21460 only; 0 genomes with orthologs for EX31_RS08690 only