Conservation of cofitness between EX28DRAFT_3732 and EX28DRAFT_2983 in Enterobacter asburiae PDN3

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_3732 poly(A) polymerase 1.0 EX28DRAFT_2983 Endonuclease I 0.64 16
Enterobacter sp. TBS_079 0.89 MPMX20_00829 Poly(A) polymerase I 0.98 MPMX20_03803 Endonuclease-1 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.85 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) low > 78
Escherichia fergusonii Becca 0.85 EFB2_03901 Poly(A) polymerase I 0.85 EFB2_00957 Endonuclease-1 low > 86
Escherichia coli BL21 0.85 ECD_00142 poly(A) polymerase 0.85 ECD_02775 DNA-specific endonuclease I low > 61
Escherichia coli Nissle 1917 0.85 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.86 ECOLIN_RS16385 deoxyribonuclease I low > 55
Escherichia coli BW25113 0.85 b0143 pcnB poly(A) polymerase I (VIMSS) 0.85 b2945 endA DNA-specific endonuclease I (NCBI) 0.36 9
Escherichia coli ECRC101 0.85 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.85 MCAODC_09805 endA deoxyribonuclease I low > 87
Escherichia coli ECRC99 0.85 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.85 KEDOAH_08855 endA deoxyribonuclease I — —
Escherichia coli ECRC100 0.85 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.85 OKFHMN_19285 endA deoxyribonuclease I low > 80
Escherichia coli ECRC98 0.85 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.85 JDDGAC_22915 endA deoxyribonuclease I low > 86
Escherichia coli ECOR38 0.85 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.85 HEPCGN_18590 endA deoxyribonuclease I low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_03519 Poly(A) polymerase I 0.85 OHPLBJKB_00773 Endonuclease-1 low > 73
Escherichia coli ECRC102 0.85 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.85 NIAGMN_17050 endA deoxyribonuclease I — —
Escherichia coli ECOR27 0.85 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.85 NOLOHH_11155 endA deoxyribonuclease I low > 75
Escherichia coli ECRC62 0.85 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.85 BNILDI_09735 endA deoxyribonuclease I low > 75
Klebsiella michiganensis M5al 0.82 BWI76_RS05005 polynucleotide adenylyltransferase 0.88 BWI76_RS24065 deoxyribonuclease I low > 92
Dickeya dadantii 3937 0.77 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.76 DDA3937_RS18550 deoxyribonuclease I low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.76 HGI48_RS18485 deoxyribonuclease I 0.70 31
Pantoea sp. MT58 0.76 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.73 IAI47_03625 deoxyribonuclease I low > 76
Dickeya dianthicola ME23 0.76 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.77 DZA65_RS19620 deoxyribonuclease I low > 75
Serratia liquefaciens MT49 0.76 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.73 IAI46_21380 deoxyribonuclease I low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.76 HER17_RS02645 deoxyribonuclease I low > 75
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_03145 polynucleotide adenylyltransferase PcnB 0.61 CSW01_02500 deoxyribonuclease low > 62
Shewanella oneidensis MR-1 0.54 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.55 SO0833 endA endonuclease I (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_3406 poly(A) polymerase (RefSeq) 0.55 Shewana3_3443 endonuclease I (RefSeq) low > 73
Shewanella loihica PV-4 0.52 Shew_3131 poly(A) polymerase (RefSeq) 0.55 Shew_3223 deoxyribonuclease I (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.53 Sama_0576 deoxyribonuclease I (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0830 Poly(A) polymerase 0.46 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0830 Poly(A) polymerase 0.46 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas sp. S08-1 0.43 OH686_17255 Poly(A) polymerase 0.44 OH686_20125 Endonuclease I precursor low > 80
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_14395 poly(A) polymerase 0.45 AO353_20795 deoxyribonuclease low > 101
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.44 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.47 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas sp. RS175 0.42 PFR28_03719 Poly(A) polymerase I 0.46 PFR28_02739 Extracellular deoxyribonuclease low > 88
Pseudomonas fluorescens SBW25 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.46 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.46 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.46 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) low > 103
Pseudomonas simiae WCS417 0.42 PS417_23900 poly(A) polymerase 0.46 PS417_18420 deoxyribonuclease low > 88
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16070 poly(A) polymerase 0.46 AO356_00985 deoxyribonuclease low > 104
Pseudomonas stutzeri RCH2 0.41 Psest_0998 poly(A) polymerase 0.47 Psest_1274 Endonuclease I low > 67

Not shown: 18 genomes with orthologs for EX28DRAFT_3732 only; 1 genomes with orthologs for EX28DRAFT_2983 only