Conservation of cofitness between EX28DRAFT_2079 and EX28DRAFT_2774 in Enterobacter asburiae PDN3

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_2079 type II secretion system protein D 1.0 EX28DRAFT_2774 glutamate-cysteine ligase (EC 6.3.2.2) 0.66 3
Enterobacter sp. TBS_079 0.87 MPMX20_01515 Putative secretin GspD 0.98 MPMX20_03568 Glutamate--cysteine ligase low > 85
Rahnella sp. WP5 0.60 EX31_RS16165 type II secretion system secretin GspD 0.75 EX31_RS07750 glutamate--cysteine ligase low > 89
Escherichia coli BW25113 0.54 b3325 yheF putative general protein secretion protein (VIMSS) 0.88 b2688 gshA glutamate--cysteine ligase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00378 Putative type II secretion system protein D 0.88 OHPLBJKB_01045 Glutamate--cysteine ligase low > 73
Escherichia coli Nissle 1917 0.54 ECOLIN_RS19060 type II secretion system secretin GspD 0.88 ECOLIN_RS14990 glutamate--cysteine ligase low > 55
Escherichia fergusonii Becca 0.53 EFB2_00498 Putative secretin GspD 0.88 EFB2_01238 Glutamate--cysteine ligase low > 86
Klebsiella michiganensis M5al 0.51 BWI76_RS05090 type II secretion system protein GspD 0.89 BWI76_RS22120 glutamate--cysteine ligase low > 92
Pectobacterium carotovorum WPP14 0.50 HER17_RS06685 type II secretion system secretin GspD 0.75 HER17_RS05095 glutamate--cysteine ligase low > 75
Escherichia coli ECRC102 0.49 NIAGMN_28605 etpD variant type II secretion system secretin EtpD 0.88 NIAGMN_18530 gshA glutamate--cysteine ligase — —
Escherichia coli ECRC98 0.49 JDDGAC_30295 etpD variant type II secretion system secretin EtpD 0.88 JDDGAC_24425 gshA glutamate--cysteine ligase low > 86
Escherichia coli ECRC100 0.49 OKFHMN_00285 etpD variant type II secretion system secretin EtpD 0.88 OKFHMN_20760 gshA glutamate--cysteine ligase low > 80
Escherichia coli ECRC101 0.49 MCAODC_15265 etpD variant type II secretion system secretin EtpD 0.88 MCAODC_11285 gshA glutamate--cysteine ligase low > 87
Dickeya dadantii 3937 0.49 DDA3937_RS14800 type II secretion system secretin GspD 0.75 DDA3937_RS16195 glutamate--cysteine ligase low > 74
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_13790 type II secretion system protein GspD 0.56 CSW01_02970 glutamate--cysteine ligase — —
Alteromonas macleodii MIT1002 0.41 MIT1002_03976 Pullulanase secretion envelope PulD 0.44 MIT1002_01222 Glutamate--cysteine ligase 0.89 18
Shewanella loihica PV-4 0.40 Shew_3619 general secretion pathway protein D (RefSeq) 0.44 Shew_1227 glutamate--cysteine ligase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.40 SO0166 gspD general secretion pathway protein D (NCBI ptt file) 0.44 SO3559 gshA glutamate--cysteine ligase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.40 Shewana3_0151 general secretion pathway protein D (RefSeq) 0.45 Shewana3_3160 glutamate-cysteine ligase (RefSeq) — —
Shewanella amazonensis SB2B 0.40 Sama_0169 type II and III secretion system protein (RefSeq) 0.48 Sama_1058 glutamate--cysteine ligase (RefSeq) low > 62
Escherichia coli ECOR27 0.39 NOLOHH_10975 gspD general secretion pathway protein D 0.88 NOLOHH_12600 gshA glutamate--cysteine ligase low > 75
Escherichia coli BL21 0.39 ECD_02838 putative type II secretion protein GspD 0.88 ECD_02543 glutamate-cysteine ligase 0.80 29
Escherichia coli ECOR38 0.39 HEPCGN_18050 gspD general secretion pathway protein D 0.88 HEPCGN_19955 gshA glutamate--cysteine ligase low > 87
Erwinia tracheiphila SCR3 0.34 LU632_RS25230 gspD type II secretion system secretin GspD 0.69 LU632_RS15690 gshA glutamate--cysteine ligase low > 74
Dickeya dianthicola ME23 0.29 DZA65_RS16270 type II secretion system secretin GspD 0.73 DZA65_RS17400 glutamate--cysteine ligase low > 75
Dickeya dianthicola 67-19 0.29 HGI48_RS15450 type II secretion system secretin GspD 0.73 HGI48_RS16305 glutamate--cysteine ligase low > 71
Pseudomonas sp. S08-1 0.28 OH686_11840 type II secretion system protein D 0.38 OH686_11110 glutamate--cysteine ligase 0.49 67
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_0689 general secretion pathway protein D 0.41 B158DRAFT_2251 glutamate-cysteine ligase (EC 6.3.2.2) — —
Marinobacter adhaerens HP15 0.23 HP15_2355 type II and III secretion system protein 0.35 HP15_217 glutamate--cysteine ligase — —
Pseudomonas stutzeri RCH2 0.23 Psest_2577 general secretion pathway protein D 0.36 Psest_3998 glutamate--cysteine ligase 0.21 34
Acinetobacter radioresistens SK82 0.23 MPMX26_00196 Secretin XcpQ 0.34 MPMX26_02950 Glutamate--cysteine ligase low > 36
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_651 General secretion pathway protein D 0.38 Pf6N2E2_3908 Glutamate--cysteine ligase (EC 6.3.2.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_09345 type II secretion system protein GspD 0.39 AO356_10185 glutamate--cysteine ligase low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1390 General secretion pathway protein D 0.34 GFF3561 Glutamate--cysteine ligase (EC 6.3.2.2) 0.44 67
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_12545 type II secretion system protein GspD 0.38 AO353_11730 glutamate--cysteine ligase low > 101
Pseudomonas fluorescens SBW25 0.20 PFLU_RS11890 type II secretion system secretin GspD 0.37 PFLU_RS01265 glutamate--cysteine ligase — —
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS11890 type II secretion system secretin GspD 0.37 PFLU_RS01265 glutamate--cysteine ligase — —
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_266 General secretion pathway protein D 0.37 PfGW456L13_430 Glutamate--cysteine ligase (EC 6.3.2.2) low > 87
Pseudomonas simiae WCS417 0.19 PS417_11295 general secretion pathway protein GspD 0.37 PS417_01155 glutamate--cysteine ligase — —
Variovorax sp. OAS795 0.19 ABID97_RS06950 type II secretion system secretin GspD 0.35 ABID97_RS20965 glutamate--cysteine ligase low > 91
Variovorax sp. SCN45 0.18 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.34 GFF7064 Glutamate--cysteine ligase (EC 6.3.2.2) low > 127
Pseudomonas putida KT2440 0.16 PP_1046 Type II secretion pathway protein XcpQ 0.37 PP_0243 Glutamate--cysteine ligase — —
Acidovorax sp. GW101-3H11 0.16 Ac3H11_2030 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.32 Ac3H11_3126 Glutamate--cysteine ligase (EC 6.3.2.2) low > 79
Pseudomonas sp. RS175 0.15 PFR28_01750 Secretin XcpQ 0.39 PFR28_04865 Glutamate--cysteine ligase low > 88

Not shown: 10 genomes with orthologs for EX28DRAFT_2079 only; 14 genomes with orthologs for EX28DRAFT_2774 only