Conservation of cofitness between ECD_03886 and ECD_04111 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03886 malate synthase A 1.0 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification 0.58 22
Escherichia coli BW25113 1.00 b4014 aceB malate synthase (NCBI) 1.00 b4243 yjgF orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC99 0.99 KEDOAH_14890 aceB malate synthase A 1.00 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Escherichia coli ECRC102 0.99 NIAGMN_11020 aceB malate synthase A 1.00 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Escherichia coli ECRC101 0.99 MCAODC_03770 aceB malate synthase A 1.00 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 87
Escherichia coli ECRC98 0.99 JDDGAC_16895 aceB malate synthase A 1.00 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 86
Escherichia coli ECRC100 0.99 OKFHMN_13270 aceB malate synthase A 1.00 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 80
Escherichia coli ECRC62 0.99 BNILDI_06105 aceB malate synthase A 1.00 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_05415 aceB malate synthase A 1.00 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_11910 aceB malate synthase A 1.00 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04036 Malate synthase A 1.00 OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase low > 73
Escherichia fergusonii Becca 0.99 EFB2_04596 Malate synthase A 1.00 EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS25510 malate synthase A 1.00 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1351 Malate synthase (EC 2.3.3.9) 0.95 GFF928 Endoribonuclease L-PSP low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS01660 malate synthase A 0.96 BWI76_RS02985 reactive intermediate/imine deaminase low > 92
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4330 malate synthase A 0.95 EX28DRAFT_3444 reactive intermediate/imine deaminase low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_00231 Malate synthase A 0.95 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase low > 85
Serratia liquefaciens MT49 0.84 IAI46_23195 malate synthase A 0.83 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS02290 malate synthase A 0.83 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Rahnella sp. WP5 0.82 EX31_RS11740 malate synthase A 0.90 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase low > 89
Dickeya dadantii 3937 0.82 DDA3937_RS19060 malate synthase A 0.88 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase low > 74
Dickeya dianthicola ME23 0.81 DZA65_RS20270 malate synthase A 0.88 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS19150 malate synthase A 0.88 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase — —
Pantoea sp. MT58 0.73 IAI47_18010 malate synthase A 0.90 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03825 malate synthase A 0.82 CSW01_12735 RidA family protein low > 62
Azospirillum brasilense Sp245 0.52 AZOBR_RS03245 malate synthase 0.44 AZOBR_RS32435 dfrA low > 97
Azospirillum sp. SherDot2 0.50 MPMX19_02139 Malate synthase A 0.28 MPMX19_04018 2-aminomuconate deaminase low > 112
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_09260 malate synthase A 0.38 CA264_17590 RidA family protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.310.1 Malate synthase (EC 2.3.3.9) 0.49 Xcc-8004.1205.1 hypothetical protein low > 74
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13315 aceB malate synthase A 0.43 OKGIIK_12095 ridA reactive intermediate/imine deaminase low > 52
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS10590 malate synthase A 0.43 LRK54_RS11800 RidA family protein low > 59
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS13485 malate synthase A 0.45 ABZR86_RS11845 RidA family protein low > 74
Rhodanobacter denitrificans MT42 0.46 LRK55_RS10230 malate synthase A 0.43 LRK55_RS11525 RidA family protein low > 63
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS15200 malate synthase 0.22 HSERO_RS05705 endoribonuclease L-PSP — —
Paraburkholderia graminis OAS925 0.45 ABIE53_002540 malate synthase 0.28 ABIE53_004706 2-iminobutanoate/2-iminopropanoate deaminase low > 113
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12305 Malate synthase (EC 2.3.3.9) (from data) 0.25 BPHYT_RS34350 endoribonuclease L-PSP low > 109
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00576 malate synthase 0.26 H281DRAFT_03549 reactive intermediate/imine deaminase low > 103
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS06250 malate synthase A 0.45 QEN71_RS41190 RidA family protein — —
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS12175 malate synthase 0.31 RR42_RS30085 hypothetical protein low > 128

Not shown: 14 genomes with orthologs for ECD_03886 only; 22 genomes with orthologs for ECD_04111 only