| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03500 | | ribonuclease PH | 1.0 | ECD_03677 | | putative protoheme IX synthesis protein | 0.65 | 1 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00059 | | Ribonuclease PH | 1.00 | OHPLBJKB_04251 | | Protein HemY | low | > 73 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_04045 | rph | ribonuclease PH | 1.00 | BNILDI_04925 | hemY | protoheme IX biogenesis protein HemY | low | > 75 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_07470 | rph | ribonuclease PH | 1.00 | NOLOHH_06610 | hemY | protoheme IX biogenesis protein HemY | low | > 75 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_15590 | rph | ribonuclease PH | 1.00 | OKFHMN_14465 | hemY | protoheme IX biogenesis protein HemY | low | > 80 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_06100 | rph | ribonuclease PH | 1.00 | MCAODC_04970 | hemY | protoheme IX biogenesis protein HemY | low | > 87 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_19215 | rph | ribonuclease PH | 1.00 | JDDGAC_18090 | hemY | protoheme IX biogenesis protein HemY | low | > 86 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_14410 | rph | ribonuclease PH | 1.00 | HEPCGN_13185 | hemY | protoheme IX biogenesis protein HemY | low | > 87 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_13350 | rph | ribonuclease PH | 1.00 | NIAGMN_12220 | hemY | protoheme IX biogenesis protein HemY | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_12555 | rph | ribonuclease PH | 1.00 | KEDOAH_13685 | hemY | protoheme IX biogenesis protein HemY | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_00170 | | Ribonuclease PH | 1.00 | EFB2_04836 | | Protein HemY | low | > 86 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS20755 | | ribonuclease PH | 1.00 | ECOLIN_RS21820 | | protoheme IX biogenesis protein HemY | low | > 55 |
| Escherichia coli BW25113 | 0.93 | b3643 | rph | ribonuclease PH (NCBI) | 1.00 | b3802 | hemY | predicted protoheme IX synthesis protein (NCBI) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF366 | | Ribonuclease PH (EC 2.7.7.56) | 0.92 | GFF226 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | low | > 78 |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS27390 | | ribonuclease PH | 0.89 | BWI76_RS01165 | | protoheme IX biogenesis protein HemY | low | > 92 |
| Enterobacter sp. TBS_079 | 0.92 | MPMX20_00092 | | Ribonuclease PH | 0.87 | MPMX20_04473 | | Protein HemY | low | > 85 |
| Enterobacter asburiae PDN3 | 0.91 | EX28DRAFT_3893 | | ribonuclease PH | 0.88 | EX28DRAFT_4471 | | heme biosynthesis-associated TPR protein | low | > 76 |
| Dickeya dadantii 3937 | 0.89 | DDA3937_RS20540 | | ribonuclease PH | 0.68 | DDA3937_RS19935 | | protoheme IX biogenesis protein HemY | 0.63 | 52 |
| Dickeya dianthicola ME23 | 0.88 | DZA65_RS00730 | | ribonuclease PH | 0.66 | DZA65_RS21135 | | protoheme IX biogenesis protein HemY | low | > 75 |
| Dickeya dianthicola 67-19 | 0.88 | HGI48_RS00675 | | ribonuclease PH | 0.66 | HGI48_RS20090 | | protoheme IX biogenesis protein HemY | low | > 71 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_24850 | | ribonuclease PH | 0.72 | IAI46_00680 | | protoheme IX biogenesis protein HemY | low | > 86 |
| Pantoea sp. MT58 | 0.87 | IAI47_00595 | | ribonuclease PH | 0.73 | IAI47_18440 | | protoheme IX biogenesis protein HemY | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.86 | LU632_RS22020 | rph | ribonuclease PH | 0.76 | LU632_RS24175 | hemY | protoheme IX biogenesis protein HemY | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS20855 | | ribonuclease PH | 0.72 | HER17_RS01300 | | protoheme IX biogenesis protein HemY | low | > 75 |
| Rahnella sp. WP5 | 0.85 | EX31_RS14505 | | ribonuclease PH | 0.74 | EX31_RS15130 | | protoheme IX biogenesis protein HemY | low | > 89 |
| Shewanella amazonensis SB2B | 0.77 | Sama_0320 | | tRNA nucleotidyltransferase (RefSeq) | 0.12 | Sama_3257 | | HemY protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.77 | Shew_3488 | | ribonuclease PH (RefSeq) | 0.13 | Shew_0315 | | HemY domain-containing protein (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.77 | CSW01_01115 | | ribonuclease PH | 0.29 | CSW01_00595 | | heme biosynthesis protein HemY | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.75 | MIT1002_04071 | | Ribonuclease PH | 0.14 | MIT1002_00099 | | putative protoheme IX biogenesis protein | low | > 70 |
| Pseudomonas sp. S08-1 | 0.71 | OH686_13570 | | ribonuclease PH | 0.12 | OH686_13915 | | Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.70 | B158DRAFT_0588 | | ribonuclease PH | 0.18 | B158DRAFT_0255 | | Uncharacterized enzyme of heme biosynthesis | low | > 40 |
| Marinobacter adhaerens HP15 | 0.70 | HP15_300 | | ribonuclease PH | 0.14 | HP15_237 | | HemY domain protein | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.70 | Psest_3813 | | ribonuclease PH | 0.16 | Psest_3745 | | Uncharacterized enzyme of heme biosynthesis | low | > 67 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.69 | Psyr_0213 | | RNAse PH | 0.11 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.69 | Psyr_0213 | | RNAse PH | 0.11 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | low | > 86 |
| Pseudomonas putida KT2440 | 0.69 | PP_5294 | | Ribonuclease PH | 0.12 | PP_0189 | | putative heme biosynthesis protein | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.69 | Pf6N2E2_4365 | | Ribonuclease PH (EC 2.7.7.56) | 0.15 | Pf6N2E2_4433 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.69 | Pf1N1B4_2117 | | Ribonuclease PH (EC 2.7.7.56) | 0.12 | Pf1N1B4_2188 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.69 | AO356_12500 | | ribonuclease PH | 0.14 | AO356_12800 | | heme biosynthesis protein HemY | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.69 | PfGW456L13_784 | | Ribonuclease PH (EC 2.7.7.56) | 0.12 | PfGW456L13_859 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.69 | AO353_09260 | | ribonuclease PH | 0.13 | AO353_08975 | | heme biosynthesis protein HemY | low | > 101 |
| Pseudomonas sp. RS175 | 0.68 | PFR28_04420 | | Ribonuclease PH | 0.13 | PFR28_04363 | | Protein HemY | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.68 | PFLU_RS29490 | | ribonuclease PH | 0.13 | PFLU_RS29195 | | heme biosynthesis protein HemY | low | > 109 |
| Pseudomonas simiae WCS417 | 0.68 | PS417_27810 | | ribonuclease PH | 0.13 | PS417_27515 | | heme biosynthesis protein HemY | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.68 | PFLU_RS29490 | | ribonuclease PH | 0.13 | PFLU_RS29195 | | heme biosynthesis protein HemY | low | > 109 |
Not shown: 44 genomes with orthologs for ECD_03500 only; 0 genomes with orthologs for ECD_03677 only