Conservation of cofitness between ECD_00218 and ECD_03516 in Escherichia coli BL21

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00218 type 2 glutamine amidotransferase family protein 1.0 ECD_03516 Int low > 61
Escherichia coli ECOR38 0.99 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ 1.00 HEPCGN_14290 fimB integrase low > 87
Escherichia coli ECRC62 0.99 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ 0.65 BNILDI_09605 integrase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ 0.22 OHPLBJKB_01203 Prophage integrase IntA low > 73
Escherichia coli BW25113 0.99 b0223 yafJ predicted amidotransfease (NCBI) 0.48 b2349 intS CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_03794 Putative glutamine amidotransferase YafJ 0.95 EFB2_00121 Prophage integrase IntS low > 86
Escherichia coli ECRC100 0.99 OKFHMN_09770 yafJ class II glutamine amidotransferase 0.96 OKFHMN_15505 fimB integrase low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS01755 class II glutamine amidotransferase 0.96 ECOLIN_RS26185 integrase arm-type DNA-binding domain-containing protein low > 55
Escherichia coli ECRC101 0.99 MCAODC_00290 yafJ class II glutamine amidotransferase 0.96 MCAODC_06015 fimB integrase low > 87
Escherichia coli ECRC102 0.99 NIAGMN_07630 yafJ class II glutamine amidotransferase 0.96 NIAGMN_13265 fimB integrase — —
Escherichia coli ECRC99 0.99 KEDOAH_18385 yafJ class II glutamine amidotransferase 0.96 KEDOAH_12640 fimB integrase — —
Escherichia coli ECRC98 0.99 JDDGAC_13395 yafJ class II glutamine amidotransferase 0.96 JDDGAC_19130 fimB integrase low > 86
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2666 Predicted glutamine amidotransferase 0.62 EX28DRAFT_2648 Integrase low > 76
Klebsiella michiganensis M5al 0.89 BWI76_RS05480 class II glutamine amidotransferase 0.62 BWI76_RS05825 putative site specific integrase low > 92
Erwinia tracheiphila SCR3 0.88 LU632_RS01140 class II glutamine amidotransferase 0.49 LU632_RS07185 tyrosine-type recombinase/integrase low > 74
Serratia liquefaciens MT49 0.86 IAI46_04345 class II glutamine amidotransferase 0.65 IAI46_05415 tyrosine-type recombinase/integrase low > 86
Rahnella sp. WP5 0.86 EX31_RS21015 class II glutamine amidotransferase 0.67 EX31_RS20945 tyrosine-type recombinase/integrase low > 89
Pantoea sp. MT58 0.85 IAI47_15185 class II glutamine amidotransferase 0.46 IAI47_06050 tyrosine-type recombinase/integrase low > 76
Dickeya dadantii 3937 0.85 DDA3937_RS16585 class II glutamine amidotransferase 0.66 DDA3937_RS16520 tyrosine-type recombinase/integrase low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS04650 class II glutamine amidotransferase 0.61 HER17_RS04720 tyrosine-type recombinase/integrase low > 75
Dickeya dianthicola 67-19 0.83 HGI48_RS16655 class II glutamine amidotransferase 0.63 HGI48_RS14775 tyrosine-type recombinase/integrase low > 71
Azospirillum sp. SherDot2 0.66 MPMX19_00595 Putative glutamine amidotransferase YafJ 0.14 MPMX19_02360 Prophage integrase IntA low > 112
Azospirillum brasilense Sp245 0.64 AZOBR_RS05605 glutamine amidotransferase 0.11 AZOBR_RS30360 integrase low > 97
Pseudomonas fluorescens SBW25 0.59 PFLU_RS07540 class II glutamine amidotransferase 0.38 PFLU_RS09280 DUF4102 domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS07540 class II glutamine amidotransferase 0.38 PFLU_RS09280 DUF4102 domain-containing protein low > 109
Pseudomonas sp. S08-1 0.59 OH686_05255 Putative glutamine amidotransferase YafJ 0.37 OH686_21775 Phage integrase low > 80
Pseudomonas simiae WCS417 0.59 PS417_07455 glutamine amidotransferase 0.36 PS417_00885 integrase low > 88
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_17960 glutamine amidotransferase 0.35 AO353_11495 integrase low > 101
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3359 Glutamine amidotransferase, class-II 0.25 Pf1N1B4_3004 Integrase — —
Pseudomonas putida KT2440 0.57 PP_4581 putative amidotransferase 0.10 PP_2501 putative phage integrase low > 96
Pseudomonas stutzeri RCH2 0.55 Psest_1849 Predicted glutamine amidotransferase 0.55 Psest_4016 Integrase low > 67
Dechlorosoma suillum PS 0.54 Dsui_1425 putative glutamine amidotransferase 0.38 Dsui_0218 Integrase low > 51
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS26860 class II glutamine amidotransferase 0.23 QEN71_RS10240 tyrosine-type recombinase/integrase low > 153
Variovorax sp. OAS795 0.52 ABID97_RS04635 class II glutamine amidotransferase 0.33 ABID97_RS11165 integrase arm-type DNA-binding domain-containing protein low > 91
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04266 glutamine amidotransferase 0.41 H281DRAFT_02146 Integrase low > 103
Paraburkholderia graminis OAS925 0.51 ABIE53_003506 putative glutamine amidotransferase 0.40 ABIE53_000475 integrase low > 113
Acinetobacter radioresistens SK82 0.51 MPMX26_02412 Putative glutamine amidotransferase YafJ 0.39 MPMX26_02861 Prophage integrase IntS low > 36
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS02595 glutamine amidotransferase 0.32 RR42_RS18370 integrase low > 128
Ralstonia solanacearum PSI07 0.50 RPSI07_RS21635 class II glutamine amidotransferase 0.26 RPSI07_RS12430 DUF4102 domain-containing protein low > 81
Ralstonia solanacearum UW163 0.50 UW163_RS02010 class II glutamine amidotransferase 0.26 UW163_RS08775 integrase — —
Ralstonia solanacearum GMI1000 0.50 RS_RS02405 class II glutamine amidotransferase 0.50 RS_RS04790 DUF4102 domain-containing protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3024 Glutamine amidotransferase, class-II 0.25 GFF4358 Integrase low > 90
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16680 glutamine amidotransferase 0.22 BPHYT_RS32385 integrase low > 109
Castellaniella sp019104865 MT123 0.49 ABCV34_RS06215 class II glutamine amidotransferase 0.26 ABCV34_RS11900 tyrosine-type recombinase/integrase low > 48
Rhizobium sp. OAE497 0.10 ABIE40_RS01490 class II glutamine amidotransferase 0.15 ABIE40_RS00670 site-specific integrase low > 107

Not shown: 22 genomes with orthologs for ECD_00218 only; 14 genomes with orthologs for ECD_03516 only