Conservation of cofitness between ECD_03500 and ECD_02938 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03500 ribonuclease PH 1.0 ECD_02938 G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase low > 61
Escherichia coli ECRC62 1.00 BNILDI_04045 rph ribonuclease PH 1.00 BNILDI_01075 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00059 Ribonuclease PH 0.99 OHPLBJKB_00634 G/U mismatch-specific DNA glycosylase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_07470 rph ribonuclease PH 1.00 NOLOHH_10440 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia coli ECRC102 1.00 NIAGMN_13350 rph ribonuclease PH 0.99 NIAGMN_16415 mug G/U mismatch-specific DNA glycosylase — —
Escherichia coli ECRC100 1.00 OKFHMN_15590 rph ribonuclease PH 0.99 OKFHMN_18650 mug G/U mismatch-specific DNA glycosylase low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20755 ribonuclease PH 1.00 ECOLIN_RS17710 G/U mismatch-specific DNA glycosylase low > 55
Escherichia coli ECRC101 1.00 MCAODC_06100 rph ribonuclease PH 0.99 MCAODC_09165 mug G/U mismatch-specific DNA glycosylase low > 87
Escherichia coli ECRC99 1.00 KEDOAH_12555 rph ribonuclease PH 0.99 KEDOAH_09495 mug G/U mismatch-specific DNA glycosylase — —
Escherichia coli ECOR38 1.00 HEPCGN_14410 rph ribonuclease PH 1.00 HEPCGN_17500 mug G/U mismatch-specific DNA glycosylase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_19215 rph ribonuclease PH 0.99 JDDGAC_22285 mug G/U mismatch-specific DNA glycosylase low > 86
Escherichia fergusonii Becca 1.00 EFB2_00170 Ribonuclease PH 1.00 EFB2_00743 G/U mismatch-specific DNA glycosylase low > 86
Escherichia coli BW25113 0.93 b3643 rph ribonuclease PH (NCBI) 1.00 b3068 ygjF G/U mismatch-specific DNA glycosylase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.84 GFF3178 G:T/U mismatch-specific uracil/thymine DNA-glycosylase low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS27390 ribonuclease PH 0.74 BWI76_RS24565 mismatch-specific DNA-glycosylase low > 92
Enterobacter sp. TBS_079 0.92 MPMX20_00092 Ribonuclease PH 0.83 MPMX20_03910 G/U mismatch-specific DNA glycosylase low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3893 ribonuclease PH 0.81 EX28DRAFT_3103 G/U mismatch-specific uracil-DNA glycosylase (EC 3.2.2.-) low > 76
Serratia liquefaciens MT49 0.87 IAI46_24850 ribonuclease PH 0.62 IAI46_22135 G/U mismatch-specific DNA glycosylase low > 86
Pantoea sp. MT58 0.87 IAI47_00595 ribonuclease PH 0.60 IAI47_03045 G/U mismatch-specific DNA glycosylase low > 76
Rahnella sp. WP5 0.85 EX31_RS14505 ribonuclease PH 0.62 EX31_RS08215 G/U mismatch-specific DNA glycosylase low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS20855 ribonuclease PH 0.63 HER17_RS18420 G/U mismatch-specific DNA glycosylase low > 75
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_09260 ribonuclease PH 0.44 AO353_28115 DNA glycosylase low > 101
Pseudomonas fluorescens SBW25 0.68 PFLU_RS29490 ribonuclease PH 0.45 PFLU_RS11680 G/U mismatch-specific DNA glycosylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS29490 ribonuclease PH 0.45 PFLU_RS11680 G/U mismatch-specific DNA glycosylase low > 109
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03645 ribonuclease PH 0.45 QEN71_RS38265 G/U mismatch-specific DNA glycosylase low > 153
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS11900 ribonuclease PH 0.23 ABZR86_RS21745 mismatch-specific DNA-glycosylase low > 74
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15325 ribonuclease PH 0.47 BPHYT_RS10515 DNA glycosylase — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04008 RNAse PH 0.36 H281DRAFT_00353 G/U mismatch-specific uracil-DNA glycosylase 0.38 90
Paraburkholderia graminis OAS925 0.64 ABIE53_003234 ribonuclease PH 0.42 ABIE53_002582 TDG/mug DNA glycosylase family protein low > 113
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS04890 ribonuclease PH 0.45 RR42_RS09435 DNA glycosylase low > 128
Azospirillum brasilense Sp245 0.63 AZOBR_RS02205 ribonuclease PH 0.32 AZOBR_RS18525 uracil-DNA glycosylase low > 97
Rhodanobacter denitrificans MT42 0.61 LRK55_RS11470 ribonuclease PH 0.26 LRK55_RS03165 mismatch-specific DNA-glycosylase low > 63
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS11745 ribonuclease PH 0.26 LRK54_RS03415 mismatch-specific DNA-glycosylase low > 59
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_12150 rph ribonuclease PH 0.27 OKGIIK_10300 Mismatch-specific DNA-glycosylase — —
Azospirillum sp. SherDot2 0.60 MPMX19_02576 Ribonuclease PH 0.29 MPMX19_05950 G/U mismatch-specific DNA glycosylase low > 112
Rhodopseudomonas palustris CGA009 0.59 TX73_001710 ribonuclease PH 0.23 TX73_019835 mismatch-specific DNA-glycosylase low > 86

Not shown: 53 genomes with orthologs for ECD_03500 only; 1 genomes with orthologs for ECD_02938 only