| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03395 | | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor | 1.0 | ECD_02667 | | exonuclease V (RecBCD complex), alpha chain | 0.53 | 7 |
| Escherichia coli BW25113 | 1.00 | b3544 | dppA | dipeptide transporter (NCBI) | 1.00 | b2819 | recD | exonuclease V (RecBCD complex), alpha chain (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_03520 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | BNILDI_10420 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00162 | | Periplasmic dipeptide transport protein | 1.00 | OHPLBJKB_00911 | | RecBCD enzyme subunit RecD | low | > 73 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_08040 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | NOLOHH_11940 | recD | exodeoxyribonuclease V subunit alpha | low | > 57 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_19730 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 0.99 | JDDGAC_23720 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_12050 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 0.99 | KEDOAH_08075 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_13860 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 0.99 | NIAGMN_17825 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_06615 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 0.99 | MCAODC_10580 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_16100 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 0.99 | OKFHMN_20055 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS20280 | | dipeptide ABC transporter substrate-binding protein DppA | 0.99 | ECOLIN_RS15825 | | exodeoxyribonuclease V subunit alpha | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_00263 | | Periplasmic dipeptide transport protein | 0.99 | EFB2_01065 | | RecBCD enzyme subunit RecD | low | > 86 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_14960 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 0.98 | HEPCGN_19310 | recD | exodeoxyribonuclease V subunit alpha | low | > 85 |
| Klebsiella michiganensis M5al | 0.93 | BWI76_RS26885 | | ABC transporter substrate-binding protein | 0.69 | BWI76_RS23225 | | exonuclease V subunit alpha | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF475 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.82 | GFF1300 | | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.93 | EX28DRAFT_3804 | | ABC-type dipeptide transport system, periplasmic component | 0.70 | EX28DRAFT_2894 | | DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.93 | MPMX20_00190 | | Periplasmic dipeptide transport protein | 0.69 | MPMX20_03682 | | RecBCD enzyme subunit RecD | low | > 85 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_00475 | | ABC transporter substrate-binding protein | 0.53 | IAI46_20400 | | exodeoxyribonuclease V subunit alpha | — | — |
| Rahnella sp. WP5 | 0.86 | EX31_RS05515 | | ABC transporter substrate-binding protein | 0.30 | EX31_RS20730 | | exodeoxyribonuclease V subunit alpha | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS00220 | | ABC transporter substrate-binding protein | 0.51 | HER17_RS16520 | | exodeoxyribonuclease V subunit alpha | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.84 | LU632_RS00265 | | ABC transporter substrate-binding protein | 0.51 | LU632_RS06195 | recD | exodeoxyribonuclease V subunit alpha | — | — |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS00460 | | ABC transporter substrate-binding protein | 0.29 | DDA3937_RS11075 | | exodeoxyribonuclease V subunit alpha | — | — |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS21920 | | ABC transporter substrate-binding protein | 0.29 | DZA65_RS11475 | | exodeoxyribonuclease V subunit alpha | — | — |
| Dickeya dianthicola 67-19 | 0.83 | HGI48_RS20925 | | ABC transporter substrate-binding protein | 0.29 | HGI48_RS11095 | | exodeoxyribonuclease V subunit alpha | — | — |
| Pantoea sp. MT58 | 0.82 | IAI47_18650 | | ABC transporter substrate-binding protein | 0.52 | IAI47_03970 | | exodeoxyribonuclease V subunit alpha | low | > 76 |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS18690 | | ABC transporter | 0.25 | BPHYT_RS07980 | | exodeoxyribonuclease V subunit alpha | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.54 | QEN71_RS28705 | | ABC transporter substrate-binding protein | 0.26 | QEN71_RS23185 | | exodeoxyribonuclease V subunit alpha | — | — |
| Pseudomonas putida KT2440 | 0.53 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | 0.32 | PP_4672 | | ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease | — | — |
| Pseudomonas sp. S08-1 | 0.53 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | 0.31 | OH686_12070 | | exodeoxyribonuclease V, alpha subunit | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.53 | Psyr_4236 | | extracellular solute-binding protein, family 5 | 0.32 | Psyr_0682 | | DNA helicase/exodeoxyribonuclease V, alpha subunit | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.53 | Psyr_4236 | | extracellular solute-binding protein, family 5 | 0.32 | Psyr_0682 | | DNA helicase/exodeoxyribonuclease V, alpha subunit | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_07240 | | peptide ABC transporter substrate-binding protein | 0.33 | AO356_07910 | | exodeoxyribonuclease V subunit alpha | low | > 104 |
| Pseudomonas sp. RS175 | 0.52 | PFR28_00131 | | Periplasmic dipeptide transport protein | 0.32 | PFR28_00008 | | RecBCD enzyme subunit RecD | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.52 | Pf1N1B4_1120 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.33 | Pf1N1B4_1234 | | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.52 | PfGW456L13_5051 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.32 | PfGW456L13_5150 | | Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_04085 | | peptide ABC transporter substrate-binding protein | 0.33 | PS417_23770 | | exodeoxyribonuclease V subunit alpha | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS04115 | | ABC transporter substrate-binding protein | 0.33 | PFLU_RS25585 | | exodeoxyribonuclease V subunit alpha | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS04115 | | ABC transporter substrate-binding protein | 0.33 | PFLU_RS25585 | | exodeoxyribonuclease V subunit alpha | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_05370 | | peptide ABC transporter substrate-binding protein | 0.32 | AO353_06040 | | exodeoxyribonuclease V subunit alpha | low | > 101 |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_003951 | | dipeptide transport system substrate-binding protein | 0.32 | ABIE53_000496 | | exodeoxyribonuclease V alpha subunit | low | > 113 |
| Shewanella sp. ANA-3 | 0.43 | Shewana3_2650 | | acetate kinase (RefSeq) | 0.31 | Shewana3_2247 | | exodeoxyribonuclease V, alpha subunit (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.43 | Sama_1235 | | peptide ABC transporter, periplasmic peptide-binding protein (RefSeq) | 0.33 | Sama_1902 | | exodeoxyribonuclease V (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.42 | SO1805 | sapA | peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) | 0.29 | SO2147 | recD | exodeoxyribonuclease V, alpha subunit (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.41 | Shew_2498 | | extracellular solute-binding protein (RefSeq) | 0.32 | Shew_2131 | | exodeoxyribonuclease V, alpha subunit (RefSeq) | — | — |
Not shown: 20 genomes with orthologs for ECD_03395 only; 11 genomes with orthologs for ECD_02667 only