Conservation of cofitness between ECD_00008 and ECD_02523 in Escherichia coli BL21

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00008 transaldolase B 1.0 ECD_02523 tributyltin-inducible repressor of ygaVP 0.64 3
Escherichia coli ECOR27 1.00 NOLOHH_03410 transaldolase B 1.00 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03652 Transaldolase 1.00 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV low > 73
Escherichia coli ECRC102 1.00 NIAGMN_08930 transaldolase B 0.98 NIAGMN_18650 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC101 1.00 MCAODC_01595 transaldolase B 0.98 MCAODC_11405 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli ECRC100 1.00 OKFHMN_11080 transaldolase B 0.98 OKFHMN_20885 ygaV putative HTH-type transcriptional regulator YgaV low > 80
Escherichia coli ECRC98 1.00 JDDGAC_14675 transaldolase B 0.98 JDDGAC_24545 ygaV putative HTH-type transcriptional regulator YgaV low > 86
Escherichia coli ECRC99 1.00 KEDOAH_17075 transaldolase B 0.98 KEDOAH_07255 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli BW25113 1.00 b0008 talB transaldolase B (NCBI) 1.00 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_08195 transaldolase B 1.00 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00045 transaldolase 0.96 ECOLIN_RS14870 metalloregulator ArsR/SmtB family transcription factor — —
Escherichia fergusonii Becca 1.00 EFB2_04035 Transaldolase B 0.99 EFB2_01263 putative HTH-type transcriptional regulator YgaV low > 86
Escherichia coli ECOR38 1.00 HEPCGN_09085 transaldolase B 1.00 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV 0.71 40
Klebsiella michiganensis M5al 0.96 BWI76_RS04270 transaldolase 0.71 BWI76_RS21995 transcriptional regulator low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1083 Transaldolase (EC 2.2.1.2) 0.90 GFF1572 Transcriptional regulator, ArsR family low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00716 Transaldolase B 0.80 MPMX20_03547 putative HTH-type transcriptional regulator YgaV low > 85
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3620 transaldolase 0.80 EX28DRAFT_2752 Predicted transcriptional regulators low > 76
Pectobacterium carotovorum WPP14 0.92 HER17_RS02815 transaldolase 0.42 HER17_RS03345 metalloregulator ArsR/SmtB family transcription factor low > 75
Dickeya dianthicola ME23 0.92 DZA65_RS19465 transaldolase 0.30 DZA65_RS01015 helix-turn-helix transcriptional regulator low > 75
Dickeya dadantii 3937 0.92 DDA3937_RS18395 transaldolase 0.29 DDA3937_RS20270 helix-turn-helix transcriptional regulator low > 74
Serratia liquefaciens MT49 0.91 IAI46_03055 transaldolase 0.33 IAI46_09640 winged helix-turn-helix transcriptional regulator low > 86
Dickeya dianthicola 67-19 0.91 HGI48_RS18325 transaldolase 0.30 HGI48_RS00955 helix-turn-helix transcriptional regulator low > 71
Pantoea sp. MT58 0.90 IAI47_16195 transaldolase 0.59 IAI47_19710 helix-turn-helix transcriptional regulator low > 76
Rahnella sp. WP5 0.90 EX31_RS03920 transaldolase 0.61 EX31_RS21725 helix-turn-helix transcriptional regulator low > 89
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_17325 transaldolase 0.42 CSW01_17420 transcriptional regulator low > 62
Shewanella sp. ANA-3 0.71 Shewana3_3147 transaldolase B (RefSeq) 0.43 Shewana3_3141 ArsR family transcriptional regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO3546 tal transaldolase (NCBI ptt file) 0.43 SO3538 hlyU transcriptional regulator HlyU (NCBI ptt file) — —
Shewanella loihica PV-4 0.70 Shew_1089 transaldolase B (RefSeq) 0.42 Shew_1095 ArsR family transcriptional regulator (RefSeq) — —
Shewanella amazonensis SB2B 0.70 Sama_0913 transaldolase B (RefSeq) 0.44 Sama_0920 transcriptional regulator HlyU (RefSeq) — —
Alteromonas macleodii MIT1002 0.69 MIT1002_03080 Transaldolase B 0.27 MIT1002_02372 Biofilm growth-associated repressor — —
Pseudomonas simiae WCS417 0.61 PS417_07730 transaldolase 0.39 PS417_17530 ArsR family transcriptional regulator — —
Pseudomonas stutzeri RCH2 0.58 Psest_2708 transaldolase 0.36 Psest_1782 Predicted transcriptional regulators low > 67
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_00310 transaldolase 0.40 AO353_26620 ArsR family transcriptional regulator low > 101
Rhizobium sp. OAE497 0.56 ABIE40_RS16940 transaldolase 0.38 ABIE40_RS13515 metalloregulator ArsR/SmtB family transcription factor — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.40 PfGW456L13_3537 Transcriptional regulator, ArsR family low > 87
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.40 Pf1N1B4_4483 Transcriptional regulator, ArsR family low > 87
Acidovorax sp. GW101-3H11 0.52 Ac3H11_2059 Transaldolase (EC 2.2.1.2) 0.35 Ac3H11_2264 Transcriptional regulator, ArsR family low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1363 Transaldolase (EC 2.2.1.2) 0.43 GFF3245 Transcriptional regulator, ArsR family low > 90
Variovorax sp. SCN45 0.51 GFF5266 Transaldolase (EC 2.2.1.2) 0.30 GFF6927 Transcriptional regulator, ArsR family low > 127
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00286 transaldolase 0.33 H281DRAFT_02691 transcriptional regulator, ArsR family low > 103
Castellaniella sp019104865 MT123 0.49 ABCV34_RS15500 transaldolase 0.33 ABCV34_RS01430 metalloregulator ArsR/SmtB family transcription factor low > 48
Acinetobacter radioresistens SK82 0.47 MPMX26_01753 Transaldolase 0.29 MPMX26_01494 Biofilm growth-associated repressor low > 36

Not shown: 20 genomes with orthologs for ECD_00008 only; 14 genomes with orthologs for ECD_02523 only