Conservation of cofitness between ECD_02735 and ECD_02521 in Escherichia coli BL21

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 1.0 ECD_02521 uncharacterized protein low > 61
Escherichia coli ECRC62 1.00 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 BNILDI_11280 kbp potassium binding protein Kbp low > 75
Escherichia coli BW25113 1.00 b2903 gcvP glycine dehydrogenase (NCBI) 1.00 b2665 ygaU hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 1.00 OHPLBJKB_01067 putative protein YgaU low > 73
Escherichia coli ECRC99 1.00 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 KEDOAH_07245 kbp potassium binding protein Kbp — —
Escherichia coli ECRC100 1.00 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 OKFHMN_20895 kbp potassium binding protein Kbp low > 80
Escherichia coli ECRC101 1.00 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 MCAODC_11415 kbp potassium binding protein Kbp low > 87
Escherichia coli ECRC102 1.00 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 NIAGMN_18660 kbp potassium binding protein Kbp — —
Escherichia coli ECRC98 1.00 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 JDDGAC_24555 kbp potassium binding protein Kbp low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 1.00 ECOLIN_RS14860 potassium binding protein Kbp — —
Escherichia fergusonii Becca 0.99 EFB2_00999 Glycine dehydrogenase (decarboxylating) 1.00 EFB2_01265 Potassium binding protein Kbp low > 86
Escherichia coli ECOR38 0.99 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase 0.98 HEPCGN_20170 kbp potassium binding protein Kbp low > 87
Escherichia coli ECOR27 0.99 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase 1.00 NOLOHH_12720 kbp potassium binding protein Kbp low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.95 GFF1570 FIG00638941: hypothetical protein — —
Enterobacter sp. TBS_079 0.89 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.62 MPMX20_01149 Potassium binding protein Kbp low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.62 BWI76_RS14560 peptidoglycan-binding protein LysM low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.65 EX28DRAFT_3061 BON domain/LysM domain low > 76
Pantoea sp. MT58 0.82 IAI47_03775 aminomethyl-transferring glycine dehydrogenase 0.70 IAI47_14780 peptidoglycan-binding protein LysM low > 76
Serratia liquefaciens MT49 0.81 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.75 IAI46_14930 peptidoglycan-binding protein LysM low > 86
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_2236 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.54 Pf1N1B4_1671 FIG00954962: hypothetical protein low > 87
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_904 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.53 PfGW456L13_406 FIG00954962: hypothetical protein low > 87
Pseudomonas putida KT2440 0.61 PP_5192 glycine dehydrogenase 0.53 PP_0258 regulator of murein cross-linking low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit 0.47 Psyr_4943 Peptidoglycan-binding LysM:Transport-associated low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit 0.47 Psyr_4943 Peptidoglycan-binding LysM:Transport-associated low > 86
Pseudomonas sp. RS175 0.56 PFR28_03383 Glycine dehydrogenase (decarboxylating) 0.49 PFR28_04884 Potassium binding protein Kbp low > 88
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5558 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.53 Pf6N2E2_3888 FIG00954962: hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_18170 glycine dehydrogenase 0.54 AO356_10090 peptidoglycan-binding protein LysM low > 104
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.49 PFLU_RS01375 peptidoglycan-binding protein LysM low > 109
Pseudomonas fluorescens SBW25 0.56 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.49 PFLU_RS01375 peptidoglycan-binding protein LysM low > 109
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_02409 glycine dehydrogenase 0.36 H281DRAFT_00784 Nucleoid-associated protein YgaU, contains BON and LysM domains low > 103
Pseudomonas simiae WCS417 0.56 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.53 PS417_01280 peptidoglycan-binding protein LysM low > 88
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS20070 glycine dehydrogenase 0.36 RR42_RS05460 peptidase M23 low > 128
Ralstonia solanacearum UW163 0.55 UW163_RS04950 glycine dehydrogenase (aminomethyl-transferring) 0.42 UW163_RS10440 peptidoglycan-binding protein LysM — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS08660 glycine dehydrogenase (aminomethyl-transferring) 0.42 RALBFv3_RS03285 peptidoglycan-binding protein LysM low > 76
Ralstonia solanacearum PSI07 0.55 RPSI07_RS08575 glycine dehydrogenase (aminomethyl-transferring) 0.42 RPSI07_RS13905 peptidoglycan-binding protein LysM low > 81
Ralstonia solanacearum GMI1000 0.54 RS_RS16510 glycine dehydrogenase 0.43 RS_RS10770 peptidoglycan-binding protein LysM low > 80
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS03935 aminomethyl-transferring glycine dehydrogenase 0.44 ABZR87_RS15185 peptidoglycan-binding protein LysM low > 80
Sinorhizobium meliloti 1021 0.54 SMc02049 glycine dehydrogenase 0.27 SMc02564 LysM domain/BON superfamily protein low > 103
Variovorax sp. OAS795 0.54 ABID97_RS19655 aminomethyl-transferring glycine dehydrogenase 0.43 ABID97_RS00830 peptidoglycan-binding protein LysM low > 91
Acidovorax sp. GW101-3H11 0.52 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.41 Ac3H11_1874 FIG00538483: hypothetical protein low > 79

Not shown: 46 genomes with orthologs for ECD_02735 only; 3 genomes with orthologs for ECD_02521 only