Conservation of cofitness between ECD_00008 and ECD_01930 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00008 transaldolase B 1.0 ECD_01930 UDP-glucose 6-dehydrogenase 0.55 23
Escherichia coli ECOR27 1.00 NOLOHH_03410 transaldolase B 1.00 NOLOHH_15790 ugd UDP-glucose 6-dehydrogenase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03652 Transaldolase 0.86 OHPLBJKB_01664 UDP-glucose 6-dehydrogenase — —
Escherichia coli ECRC100 1.00 OKFHMN_11080 transaldolase B 1.00 OKFHMN_24475 ugd UDP-glucose 6-dehydrogenase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_17075 transaldolase B 1.00 KEDOAH_03675 ugd UDP-glucose 6-dehydrogenase — —
Escherichia coli ECRC102 1.00 NIAGMN_08930 transaldolase B 1.00 NIAGMN_22420 ugd UDP-glucose 6-dehydrogenase — —
Escherichia coli ECRC62 1.00 BNILDI_08195 transaldolase B 0.99 BNILDI_14700 ugd UDP-glucose 6-dehydrogenase low > 75
Escherichia coli ECRC101 1.00 MCAODC_01595 transaldolase B 1.00 MCAODC_20465 ugd UDP-glucose 6-dehydrogenase low > 87
Escherichia coli BW25113 1.00 b0008 talB transaldolase B (NCBI) 1.00 b2028 ugd UDP-glucose 6-dehydrogenase (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_14675 transaldolase B 1.00 JDDGAC_28585 ugd UDP-glucose 6-dehydrogenase low > 86
Escherichia fergusonii Becca 1.00 EFB2_04035 Transaldolase B 1.00 EFB2_01827 UDP-glucose 6-dehydrogenase low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00045 transaldolase 1.00 ECOLIN_RS11985 UDP-glucose 6-dehydrogenase low > 55
Escherichia coli ECOR38 1.00 HEPCGN_09085 transaldolase B 1.00 HEPCGN_03180 ugd UDP-glucose 6-dehydrogenase low > 87
Klebsiella michiganensis M5al 0.96 BWI76_RS04270 transaldolase 0.84 BWI76_RS19020 UDP-glucose 6-dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1083 Transaldolase (EC 2.2.1.2) 0.90 GFF3904 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00716 Transaldolase B 0.86 MPMX20_03011 UDP-glucose 6-dehydrogenase — —
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3620 transaldolase 0.86 EX28DRAFT_0530 nucleotide sugar dehydrogenase — —
Pectobacterium carotovorum WPP14 0.92 HER17_RS02815 transaldolase 0.75 HER17_RS06515 nucleotide sugar dehydrogenase low > 75
Dickeya dianthicola ME23 0.92 DZA65_RS19465 transaldolase 0.76 DZA65_RS07165 nucleotide sugar dehydrogenase — —
Dickeya dadantii 3937 0.92 DDA3937_RS18395 transaldolase 0.77 DDA3937_RS06790 nucleotide sugar dehydrogenase — —
Dickeya dianthicola 67-19 0.91 HGI48_RS18325 transaldolase 0.76 HGI48_RS06825 nucleotide sugar dehydrogenase — —
Pantoea sp. MT58 0.90 IAI47_16195 transaldolase 0.19 IAI47_09035 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_17325 transaldolase 0.72 CSW01_18075 nucleotide sugar dehydrogenase low > 62
Shewanella sp. ANA-3 0.71 Shewana3_3147 transaldolase B (RefSeq) 0.78 Shewana3_1387 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO3546 tal transaldolase (NCBI ptt file) 0.73 SO4687 ugd UDP-glucose 6-dehydrogenase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.69 MIT1002_03080 Transaldolase B 0.76 MIT1002_03556 UDP-glucose 6-dehydrogenase — —
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS12545 transaldolase 0.20 ABZR86_RS07210 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Lysobacter sp. OAE881 0.63 ABIE51_RS02125 transaldolase 0.19 ABIE51_RS09065 UDP-glucose/GDP-mannose dehydrogenase family protein low > 62
Pseudomonas fluorescens SBW25 0.61 PFLU_RS07805 transaldolase 0.18 PFLU_RS17930 UDP-glucose/GDP-mannose dehydrogenase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS07805 transaldolase 0.18 PFLU_RS17930 UDP-glucose/GDP-mannose dehydrogenase family protein low > 109
Pseudomonas putida KT2440 0.57 PP_2168 Transaldolase 0.18 PP_2926 UDP-glucose 6-dehydrogenase low > 96
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1914 transaldolase 0.20 Psyr_5105 UDP-glucose 6-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1914 transaldolase 0.20 Psyr_5105 UDP-glucose 6-dehydrogenase low > 86
Marinobacter adhaerens HP15 0.55 HP15_2241 transaldolase 0.75 HP15_2385 UDP-glucose 6-dehydrogenase low > 73
Pseudomonas sp. S08-1 0.55 OH686_22740 transaldolase 0.67 OH686_14205 UDP-glucose 6-dehydrogenase low > 80
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.17 PfGW456L13_1685 GDP-mannose 6-dehydrogenase (EC 1.1.1.132) low > 87
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS05500 transaldolase 0.19 HSERO_RS18390 UDP-glucose 6-dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS11000 transaldolase 0.19 ABZR87_RS09495 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1363 Transaldolase (EC 2.2.1.2) 0.20 GFF4731 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 90
Variovorax sp. SCN45 0.51 GFF5266 Transaldolase (EC 2.2.1.2) 0.17 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) low > 127
Variovorax sp. OAS795 0.50 ABID97_RS07095 transaldolase 0.18 ABID97_RS11855 UDP-glucose/GDP-mannose dehydrogenase family protein low > 91
Castellaniella sp019104865 MT123 0.49 ABCV34_RS15500 transaldolase 0.73 ABCV34_RS12915 nucleotide sugar dehydrogenase low > 48
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4226.1 Transaldolase (EC 2.2.1.2) 0.19 Xcc-8004.3391.1 hypothetical protein — —

Not shown: 19 genomes with orthologs for ECD_00008 only; 24 genomes with orthologs for ECD_01930 only