Conservation of cofitness between ECD_02848 and ECD_01619 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02848 glycolate oxidase subunit, FAD-linked 1.0 ECD_01619 transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated 0.51 3
Escherichia coli ECRC62 1.00 BNILDI_00595 glcD glycolate oxidase subunit GlcD 1.00 BNILDI_16750 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00727 putative FAD-linked oxidoreductase 1.00 OHPLBJKB_02076 HTH-type transcriptional repressor NemR low > 73
Escherichia coli ECOR27 1.00 NOLOHH_10920 glcD glycolate oxidase subunit GlcD 1.00 NOLOHH_17960 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia coli BW25113 1.00 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) 1.00 b1649 ydhM predicted DNA-binding transcriptional regulator (RefSeq)
Escherichia fergusonii Becca 1.00 EFB2_00835 putative FAD-linked oxidoreductase 1.00 EFB2_02343 HTH-type transcriptional repressor NemR low > 86
Escherichia coli ECOR38 0.99 HEPCGN_17995 glcD glycolate oxidase subunit GlcD 0.98 HEPCGN_05825 nemR DNA-binding transcriptional regulator NemR low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17140 glycolate oxidase subunit GlcD 1.00 ECOLIN_RS09195 DNA-binding transcriptional regulator NemR low > 55
Pseudomonas stutzeri RCH2 0.84 Psest_3841 D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) 0.21 Psest_0932 Transcriptional regulator low > 67
Pseudomonas putida KT2440 0.82 PP_3745 glycolate oxidase, putative FAD-linked subunit 0.41 PP_2475 Transcriptional regulator, TetR family low > 96
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS38015 glycolate oxidase subunit GlcD 0.21 QEN71_RS20880 TetR/AcrR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS31645 FAD-binding protein 0.14 BPHYT_RS20385 TetR family transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS19105 FAD-binding protein 0.33 HSERO_RS18905 TetR family transcriptional regulator low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF2733 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.16 GFF2489 Transcriptional regulator, TetR family low > 90
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05490 FAD-binding oxidoreductase 0.34 RALBFv3_RS15205 TetR/AcrR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS08135 FAD-binding oxidoreductase 0.34 UW163_RS12675 TetR/AcrR family transcriptional regulator
Dechlorosoma suillum PS 0.60 Dsui_3415 FAD/FMN-dependent dehydrogenase 0.38 Dsui_1876 transcriptional regulator low > 51
Marinobacter adhaerens HP15 0.59 HP15_3024 FAD linked oxidase domain protein 0.21 HP15_3141 transcriptional regulator, TetR family low > 73
Ralstonia solanacearum PSI07 0.59 RPSI07_RS11810 FAD-binding oxidoreductase 0.35 RPSI07_RS18170 TetR/AcrR family transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.59 RS_RS13350 FAD-binding oxidoreductase 0.36 RS_RS06015 TetR/AcrR family transcriptional regulator low > 80
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04683 glycolate oxidase 0.36 H281DRAFT_01790 transcriptional regulator, TetR family low > 103
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS01135 FAD-linked oxidase C-terminal domain-containing protein 0.36 ABZR87_RS10845 TetR/AcrR family transcriptional regulator low > 80
Variovorax sp. OAS795 0.58 ABID97_RS03650 FAD-linked oxidase C-terminal domain-containing protein 0.23 ABID97_RS26745 TetR/AcrR family transcriptional regulator
Variovorax sp. SCN45 0.57 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.23 GFF4224 Transcriptional regulator, AcrR family low > 127
Phaeobacter inhibens DSM 17395 0.41 PGA1_c29720 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.36 PGA1_c30430 transcriptional regulator, TetR family low > 62
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_1862 FAD linked oxidase domain protein (RefSeq) 0.23 DvMF_3038 transcriptional regulator, TetR family (RefSeq)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS06545 FAD-binding oxidoreductase 0.14 ABZR88_RS11490 TetR/AcrR family transcriptional regulator low > 71
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS11500 FAD-linked oxidase C-terminal domain-containing protein 0.39 ABZR86_RS19675 TetR/AcrR family transcriptional regulator low > 74
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS15570 FAD-binding protein 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS15570 FAD-binding protein 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Rhodospirillum rubrum S1H 0.19 Rru_A0777 D-lactate dehydrogenase (cytochrome) (NCBI) 0.13 Rru_A0888 Transcriptional Regulator, TetR family (NCBI) low > 58
Pseudomonas sp. S08-1 0.18 OH686_11285 D-2-hydroxyglutarate dehydrogenase 0.24 OH686_06240 Transcriptional regulator, AcrR family low > 80
Pseudomonas simiae WCS417 0.17 PS417_27035 FAD-linked oxidase 0.36 PS417_11180 TetR family transcriptional regulator low > 88
Acinetobacter radioresistens SK82 0.16 MPMX26_02772 putative FAD-linked oxidoreductase 0.36 MPMX26_00888 HTH-type transcriptional repressor NemR low > 36

Not shown: 35 genomes with orthologs for ECD_02848 only; 16 genomes with orthologs for ECD_01619 only