Conservation of cofitness between ECD_00652 and ECD_01619 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00652 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein 1.0 ECD_01619 transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated 0.52 13
Escherichia coli ECRC100 1.00 OKFHMN_07075 kdpD two-component system sensor histidine kinase KdpD 0.97 OKFHMN_27440 nemR DNA-binding transcriptional regulator NemR low > 80
Escherichia coli ECRC99 1.00 KEDOAH_20895 kdpD two-component system sensor histidine kinase KdpD 0.97 KEDOAH_00670 nemR DNA-binding transcriptional regulator NemR
Escherichia coli ECRC101 1.00 MCAODC_26290 kdpD two-component system sensor histidine kinase KdpD 0.98 MCAODC_17970 nemR DNA-binding transcriptional regulator NemR low > 87
Escherichia coli ECRC102 1.00 NIAGMN_05130 kdpD two-component system sensor histidine kinase KdpD 0.97 NIAGMN_00625 nemR DNA-binding transcriptional regulator NemR
Escherichia coli ECRC98 1.00 JDDGAC_10725 kdpD two-component system sensor histidine kinase KdpD 0.97 JDDGAC_02030 nemR DNA-binding transcriptional regulator NemR low > 86
Escherichia coli BW25113 1.00 b0695 kdpD fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) 1.00 b1649 ydhM predicted DNA-binding transcriptional regulator (RefSeq)
Escherichia coli ECOR38 1.00 HEPCGN_01160 kdpD two-component system sensor histidine kinase KdpD 0.98 HEPCGN_05825 nemR DNA-binding transcriptional regulator NemR low > 87
Escherichia coli ECOR27 1.00 NOLOHH_23455 kdpD two-component system sensor histidine kinase KdpD 1.00 NOLOHH_17960 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03022 Sensor protein KdpD 1.00 OHPLBJKB_02076 HTH-type transcriptional repressor NemR low > 73
Escherichia coli ECRC62 1.00 BNILDI_21460 kdpD two-component system sensor histidine kinase KdpD 1.00 BNILDI_16750 nemR DNA-binding transcriptional regulator NemR low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03755 two-component system sensor histidine kinase KdpD 1.00 ECOLIN_RS09195 DNA-binding transcriptional regulator NemR low > 55
Escherichia fergusonii Becca 0.99 EFB2_03401 Sensor protein KdpD 1.00 EFB2_02343 HTH-type transcriptional repressor NemR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF4607 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.83 GFF3625 Transcriptional regulator, TetR family low > 78
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2283 Osmosensitive K+ channel histidine kinase 0.84 EX28DRAFT_1647 transcriptional regulator, TetR family low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01338 Sensor protein KdpD 0.83 MPMX20_01987 HTH-type transcriptional repressor NemR low > 85
Klebsiella michiganensis M5al 0.83 BWI76_RS08305 two-component sensor histidine kinase 0.74 BWI76_RS16470 transcriptional repressor NemR low > 92
Rahnella sp. WP5 0.68 EX31_RS23335 two-component system sensor histidine kinase KdbD 0.36 EX31_RS01435 TetR/AcrR family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.68 IAI46_06165 two-component system sensor histidine kinase KdbD 0.47 IAI46_11285 TetR/AcrR family transcriptional regulator low > 86
Pantoea sp. MT58 0.66 IAI47_01250 two-component system sensor histidine kinase KdbD 0.48 IAI47_10760 TetR/AcrR family transcriptional regulator 0.33 29
Dechlorosoma suillum PS 0.45 Dsui_0272 osmosensitive K+ channel histidine kinase 0.38 Dsui_1876 transcriptional regulator low > 51
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS24345 DUF4118 domain-containing protein 0.21 QEN71_RS20880 TetR/AcrR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS06460 histidine kinase 0.14 BPHYT_RS20385 TetR family transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04532 two-component system, OmpR family, sensor histidine kinase KdpD 0.36 H281DRAFT_01790 transcriptional regulator, TetR family low > 103
Ralstonia solanacearum PSI07 0.40 RPSI07_RS08140 sensor histidine kinase KdpD 0.35 RPSI07_RS18170 TetR/AcrR family transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.40 RS_RS16960 sensor histidine kinase KdpD 0.36 RS_RS06015 TetR/AcrR family transcriptional regulator low > 80
Ralstonia solanacearum UW163 0.40 UW163_RS04465 sensor histidine kinase KdpD 0.34 UW163_RS12675 TetR/AcrR family transcriptional regulator
Variovorax sp. SCN45 0.40 GFF3520 Osmosensitive K+ channel histidine kinase KdpD 0.23 GFF4224 Transcriptional regulator, AcrR family low > 127
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS09130 sensor histidine kinase KdpD 0.34 RALBFv3_RS15205 TetR/AcrR family transcriptional regulator low > 76
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS18855 sensor protein KdpD 0.33 HSERO_RS18905 TetR family transcriptional regulator low > 78
Variovorax sp. OAS795 0.39 ABID97_RS01010 DUF4118 domain-containing protein 0.23 ABID97_RS26745 TetR/AcrR family transcriptional regulator
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS04525 sensor histidine kinase KdpD 0.36 ABZR87_RS10845 TetR/AcrR family transcriptional regulator low > 80
Rhodospirillum rubrum S1H 0.31 Rru_A1158 Osmosensitive K+ channel Signal Transduction Histidine Kinase (NCBI) 0.13 Rru_A0888 Transcriptional Regulator, TetR family (NCBI) low > 58
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS13210 sensor histidine kinase KdpD 0.39 ABZR86_RS19675 TetR/AcrR family transcriptional regulator low > 74
Pseudomonas sp. S08-1 0.27 OH686_01890 Osmosensitive K+ channel histidine kinase KdpD 0.24 OH686_06240 Transcriptional regulator, AcrR family low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF4474 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.16 GFF2489 Transcriptional regulator, TetR family low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA 0.34 Psyr_2933 transcriptional regulator, TetR family low > 86
Pseudomonas simiae WCS417 0.26 PS417_08300 histidine kinase 0.36 PS417_11180 TetR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.26 PFLU_RS08240 sensor histidine kinase KdpD 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS08240 sensor histidine kinase KdpD 0.36 PFLU_RS11765 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.25 PP_4158 sensor protein 0.41 PP_2475 Transcriptional regulator, TetR family low > 96
Acinetobacter radioresistens SK82 0.23 MPMX26_02241 Sensor protein KdpD 0.36 MPMX26_00888 HTH-type transcriptional repressor NemR

Not shown: 28 genomes with orthologs for ECD_00652 only; 9 genomes with orthologs for ECD_01619 only