Conservation of cofitness between ECD_00443 and ECD_00606 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00443 DnaK co-chaperone, thioredoxin-like protein 1.0 ECD_00606 ribosomal silencing factor 0.72 29
Escherichia coli BW25113 1.00 b0492 ybbN putative thioredoxin-like protein (VIMSS) 1.00 b0637 ybeB orf, hypothetical protein (VIMSS) — —
Escherichia coli ECRC98 1.00 JDDGAC_11630 cnoX chaperedoxin 0.99 JDDGAC_11000 rsfS ribosome silencing factor low > 86
Escherichia coli ECOR38 1.00 HEPCGN_06615 cnoX chaperedoxin 0.99 HEPCGN_00920 rsfS ribosome silencing factor low > 87
Escherichia coli ECRC99 1.00 KEDOAH_19985 cnoX chaperedoxin 0.99 KEDOAH_20615 rsfS ribosome silencing factor — —
Escherichia coli ECRC101 1.00 MCAODC_27200 cnoX chaperedoxin 0.99 MCAODC_26570 rsfS ribosome silencing factor low > 87
Escherichia coli ECRC100 1.00 OKFHMN_07985 cnoX chaperedoxin 0.99 OKFHMN_07355 rsfS ribosome silencing factor low > 80
Escherichia coli ECOR27 1.00 NOLOHH_00975 cnoX chaperedoxin 0.99 NOLOHH_23730 rsfS ribosome silencing factor low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03182 putative protein YbbN 1.00 OHPLBJKB_03069 Ribosomal silencing factor RsfS low > 73
Escherichia coli ECRC102 1.00 NIAGMN_06035 cnoX chaperedoxin 0.99 NIAGMN_05410 rsfS ribosome silencing factor — —
Escherichia fergusonii Becca 1.00 EFB2_03563 Chaperedoxin 1.00 EFB2_03455 Ribosomal silencing factor RsfS low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02910 chaperedoxin 1.00 ECOLIN_RS03470 ribosome silencing factor — —
Escherichia coli ECRC62 0.99 BNILDI_22395 cnoX chaperedoxin 0.99 BNILDI_21740 rsfS ribosome silencing factor low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4410 FIG000875: Thioredoxin domain-containing protein EC-YbbN 0.98 GFF4550 Iojap protein low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_01090 Chaperedoxin 0.94 MPMX20_01296 Ribosomal silencing factor RsfS low > 85
Klebsiella michiganensis M5al 0.81 BWI76_RS06935 co-chaperone YbbN 0.95 BWI76_RS08045 ribosome silencing factor RsfS — —
Pantoea sp. MT58 0.79 IAI47_14380 co-chaperone YbbN 0.88 IAI47_14015 ribosome silencing factor 0.28 40
Erwinia tracheiphila SCR3 0.77 LU632_RS15275 co-chaperone YbbN 0.83 LU632_RS16365 rsfS ribosome silencing factor low > 74
Serratia liquefaciens MT49 0.75 IAI46_05335 co-chaperone YbbN 0.87 IAI46_05940 ribosome silencing factor — —
Rahnella sp. WP5 0.74 EX31_RS22595 co-chaperone YbbN 0.83 EX31_RS23130 ribosome silencing factor low > 89
Dickeya dianthicola ME23 0.73 DZA65_RS06345 co-chaperone YbbN 0.91 DZA65_RS06570 ribosome silencing factor low > 75
Pectobacterium carotovorum WPP14 0.73 HER17_RS15510 co-chaperone YbbN 0.89 HER17_RS15235 ribosome silencing factor low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS06000 co-chaperone YbbN 0.91 HGI48_RS06225 ribosome silencing factor low > 71
Dickeya dadantii 3937 0.70 DDA3937_RS05950 co-chaperone YbbN 0.93 DDA3937_RS06180 ribosome silencing factor low > 74
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_04995 co-chaperone YbbN 0.69 CSW01_04870 ribosome silencing factor low > 62
Alteromonas macleodii MIT1002 0.42 MIT1002_00529 Thioredoxin 0.65 MIT1002_01853 Ribosomal silencing factor RsfS low > 70
Shewanella oneidensis MR-1 0.39 SO2017 hypothetical thioredoxin-like protein (NCBI ptt file) 0.64 SO1170 iojap domain protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_2442 thioredoxin domain-containing protein (RefSeq) 0.64 Shewana3_0997 iojap-like protein (RefSeq) — —
Shewanella loihica PV-4 0.37 Shew_2231 thioredoxin domain-containing protein (RefSeq) 0.60 Shew_2933 iojap-like protein (RefSeq) — —
Shewanella amazonensis SB2B 0.31 Sama_1314 putative thioredoxin-like protein (RefSeq) 0.59 Sama_2586 iojap domain-containing protein (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.30 Psest_3559 thioredoxin 0.52 Psest_0510 iojap-like ribosome-associated protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4466 Thioredoxin 0.49 Psyr_4367 Iojap-related protein low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4466 Thioredoxin 0.49 Psyr_4367 Iojap-related protein low > 86
Pseudomonas sp. S08-1 0.29 OH686_15675 thioredoxin 0.53 OH686_09330 ribosome silencing factor low > 80
Marinobacter adhaerens HP15 0.28 HP15_3051 thioredoxin domain-containing protein 0.54 HP15_603 Iojap-related protein low > 73
Azospirillum brasilense Sp245 0.21 AZOBR_RS00145 thioredoxin 0.43 AZOBR_RS04065 ribosome-associated protein IOJAP low > 97
Rhodopseudomonas palustris CGA009 0.21 TX73_001395 thioredoxin 0.45 TX73_000865 ribosome silencing factor low > 86
Magnetospirillum magneticum AMB-1 0.21 AMB_RS00045 thioredoxin 0.42 AMB_RS23800 ribosome silencing factor low > 64
Dinoroseobacter shibae DFL-12 0.19 Dshi_0035 Thioredoxin domain (RefSeq) 0.42 Dshi_0087 iojap-like protein (RefSeq) low > 64

Not shown: 42 genomes with orthologs for ECD_00443 only; 11 genomes with orthologs for ECD_00606 only