Conservation of cofitness between CSW01_07625 and CSW01_18635 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07625 sulfurtransferase FdhD 1.0 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) 0.79 10
Shewanella sp. ANA-3 0.64 Shewana3_3910 formate dehydrogenase accessory protein FdhD, putative (RefSeq) 0.42 Shewana3_1677 6-phosphogluconate dehydrogenase (RefSeq) low > 73
Shewanella loihica PV-4 0.62 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) 0.42 Shew_2561 6-phosphogluconate dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.61 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) 0.43 Sama_1365 6-phosphogluconate dehydrogenase (RefSeq) 0.31 48
Shewanella oneidensis MR-1 0.61 SO4503 formate dehydrogenase accessory protein FdhD, putative (NCBI ptt file) 0.40 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.45 ABID97_RS07590 formate dehydrogenase accessory sulfurtransferase FdhD 0.51 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 91
Azospirillum brasilense Sp245 0.42 AZOBR_RS05220 formate dehydrogenase 0.41 AZOBR_RS15725 6-phosphogluconate dehydrogenase low > 97
Mucilaginibacter yixingensis YX-36 DSM 26809 0.14 ABZR88_RS07865 formate dehydrogenase accessory sulfurtransferase FdhD 0.44 ABZR88_RS02970 NADP-dependent phosphogluconate dehydrogenase
Mycobacterium tuberculosis H37Rv 0.13 Rv2899c Possible FdhD protein homolog 0.48 Rv1844c Probable 6-phosphogluconate dehydrogenase Gnd1 low > 58
Dyella japonica UNC79MFTsu3.2 0.12 ABZR86_RS03590 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 ABZR86_RS13330 NADP-dependent phosphogluconate dehydrogenase low > 74
Rhizobium sp. OAE497 0.12 ABIE40_RS17840 formate dehydrogenase accessory sulfurtransferase FdhD 0.43 ABIE40_RS11035 NADP-dependent phosphogluconate dehydrogenase 0.29 83
Pantoea sp. MT58 0.12 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD 0.50 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase
Pantoea agglomerans CFBP13505 P0401 0.12 PagCFBP13505_RS15775 formate dehydrogenase accessory sulfurtransferase FdhD 0.50 PagCFBP13505_RS01160 NADP-dependent phosphogluconate dehydrogenase
Serratia liquefaciens MT49 0.12 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase
Escherichia fergusonii Becca 0.11 EFB2_04720 Sulfur carrier protein FdhD 0.52 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating low > 86
Sinorhizobium meliloti 1021 0.11 SMc03085 formate dehydrogenase accessory protein 0.41 SMc04262 6-phosphogluconate dehydrogenase low > 103
Escherichia coli Nissle 1917 0.11 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase low > 55
Alteromonas macleodii MIT1002 0.11 MIT1002_01712 formate dehydrogenase accessory protein 0.42 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating low > 70
Escherichia coli ECOR27 0.11 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase low > 76
Escherichia coli ECOR38 0.11 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase low > 88
Escherichia coli ECRC102 0.11 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase low > 80
Escherichia coli ECRC99 0.11 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC101 0.11 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.11 OHPLBJKB_04155 Sulfur carrier protein FdhD 0.52 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating low > 74
Escherichia coli ECRC100 0.11 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase low > 79
Escherichia coli BW25113 0.11 b3895 fdhD formate dehydrogenase accessory protein (NCBI) 0.52 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.11 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase low > 75
Escherichia coli BL21 0.11 ECD_03780 formate dehydrogenase formation protein 0.52 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating low > 61
Escherichia coli ECRC98 0.11 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Paraburkholderia bryophila 376MFSha3.1 0.11 H281DRAFT_06437 FdhD protein 0.52 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) low > 103
Burkholderia phytofirmans PsJN 0.11 BPHYT_RS03240 formate dehydrogenase accessory protein FdhD 0.50 BPHYT_RS29625 6-phosphogluconate dehydrogenase low > 109
Erwinia amylovora T8 0.10 OLJFJH_05050 formate dehydrogenase accessory sulfurtransferase FdhD 0.51 OLJFJH_12140 NADP-dependent phosphogluconate dehydrogenase
Dickeya dianthicola ME23 0.10 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.53 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase low > 75
Dickeya dadantii 3937 0.10 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase low > 74
Dickeya dianthicola 67-19 0.10 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase 0.53 31
Variovorax sp. SCN45 0.10 GFF5642 Sulfur carrier protein FdhD 0.51 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Paraburkholderia sabiae LMG 24235 0.10 QEN71_RS02080 formate dehydrogenase accessory sulfurtransferase FdhD 0.53 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.10 ABIE53_000787 FdhD protein 0.51 ABIE53_005122 6-phosphogluconate dehydrogenase low > 113
Rahnella sp. WP5 0.10 EX31_RS05780 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase
Enterobacter sp. TBS_079 0.10 MPMX20_04574 Sulfur carrier protein FdhD 0.51 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating 0.33 2
Enterobacter asburiae PDN3 0.10 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD 0.51 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) low > 76

Not shown: 24 genomes with orthologs for CSW01_07625 only; 20 genomes with orthologs for CSW01_18635 only